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BD02T64_scaffold_2682

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2682_1
Alteromonadaceae bacterium Bsc2, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1002
DNA (1002bp) protein (334aa)
Elongation factor Tu n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L2K7_9GAMM
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1500540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae.;" source="Alteromonadac
translation elongation factor 1A (EF-1A/EF-Tu)
BD02T64_scaffold_2682_2
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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1191..1559
DNA (369bp) protein (123aa)
Protein translocase subunit SecE n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZT70_PSEAC
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
secE; preprotein translocase subunit SecE
BD02T64_scaffold_2682_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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1565..2098
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BPQ1_TERTT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source=
nusG; transcription termination/antitermination factor NusG
BD02T64_scaffold_2682_4

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2186..2617
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KNT3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO05232.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplK; 50S ribosomal protein L11
BD02T64_scaffold_2682_5
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2617..3312
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGR4_NEPCE
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensi
rplA; 50S ribosomal protein L1
BD02T64_scaffold_2682_6
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3562..4092
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=RL10_SACD2
LSU ribosomal protein L10P
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharop
BD02T64_scaffold_2682_7
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4138..4518
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Teredinibacter turnerae RepID=UPI00037EB656
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibac
BD02T64_scaffold_2682_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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4694..8773
DNA (4080bp) protein (1360aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=RPOB_CELJU
BD02T64_scaffold_2682_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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8844..13049
DNA (4206bp) protein (1402aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YNY7_9GAMM
BD02T64_scaffold_2682_10
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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13187..13561
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YNY8_9GAMM rbh
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma
30S ribosomal protein S12
BD02T64_scaffold_2682_11
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

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13656..14126
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=gamma proteobacterium BDW918 RepID=I2JM05_9GAMM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
rpsG; 30S ribosomal protein S7
BD02T64_scaffold_2682_12
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14231..16330
DNA (2100bp) protein (700aa)
elongation factor G n=1 Tax=Spongiibacter tropicus RepID=UPI0003B53857
Translation elongation factor EF-G {ECO:0000313|EMBL:AKH68593.1}; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spon
translation elongation factor 2 (EF-2/EF-G)
BD02T64_scaffold_2682_13
Alteromonadaceae bacterium Bsc2, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16414..16662
DNA (249bp) protein (83aa)
tuf-1; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu (Fragment) n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0W9G4_9GAMM
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1500540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae.;" source="Alteromonadac
Displaying 13 items

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