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BD02T64_scaffold_1083

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1083_1
unknown

Not on your lists

3..260
DNA (258bp) protein (86aa)

This feature has no annotations

BD02T64_scaffold_1083_2
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..2182)
DNA (1977bp) protein (659aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KLX8_SIMAS
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU99088.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 /
BD02T64_scaffold_1083_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2367..4934)
DNA (2568bp) protein (856aa)
ClpB protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPZ3_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATP-dependent chaperone ClpB
BD02T64_scaffold_1083_4
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5056..5376)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035E973C rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
hypothetical protein
BD02T64_scaffold_1083_5
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5410..6324)
DNA (915bp) protein (305aa)
Thioredoxin n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5R1_9GAMM
Thioredoxin {ECO:0000313|EMBL:EAQ98358.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
thioredoxin
BD02T64_scaffold_1083_6
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6321..10223)
DNA (3903bp) protein (1301aa)
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
phosphoribosylformylglycinamidine synthase n=1 Tax=Gilvimarinus chinensis RepID=UPI000382AA39
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
BD02T64_scaffold_1083_7
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10712..12634
DNA (1923bp) protein (641aa)
PrkA family serine protein kinase n=1 Tax=Teredinibacter turnerae RepID=UPI0003759632
Kinase PrkA {ECO:0000313|EMBL:ACR12512.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" source="Teredi
prkA; kinase PrkA
BD02T64_scaffold_1083_8
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12658..13917
DNA (1260bp) protein (420aa)
UPF0229 protein M5M_15535 n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KM48_SIMAS
hypothetical protein
UPF0229 protein M5M_15535 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 1388
BD02T64_scaffold_1083_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13914..15461
DNA (1548bp) protein (516aa)
SpoVR family protein n=3 Tax=Pseudomonas aeruginosa RepID=S0HXR1_PSEAI
SpoVR family protein
SpoVR family protein {ECO:0000313|EMBL:ERV72705.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino
BD02T64_scaffold_1083_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(15480..16580)
DNA (1101bp) protein (367aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A441 rbh
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
NAD-dependent epimerase/dehydratase
BD02T64_scaffold_1083_11
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16790..17128
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HGN8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98569.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
aminoacylase
BD02T64_scaffold_1083_12
unknown

Not on your lists

comp(17316..17618)
DNA (303bp) protein (101aa)

This feature has no annotations

BD02T64_scaffold_1083_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17702..18880)
DNA (1179bp) protein (393aa)
PREDICTED: long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C178DA
Uncharacterized protein {ECO:0000313|EMBL:EKS36481.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
acyl-CoA dehydrogenase
BD02T64_scaffold_1083_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19244..20422)
DNA (1179bp) protein (393aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
PREDICTED: long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C178DA
acyl-CoA dehydrogenase
BD02T64_scaffold_1083_15
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20474..20917)
DNA (444bp) protein (148aa)
MaoC-like protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1V4_9MYCO
Dehydratase {ECO:0000313|EMBL:KKC02599.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
acyl dehydratase
BD02T64_scaffold_1083_16
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20914..21453)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HT25_MYCRH
Scaffold9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31672.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
BD02T64_scaffold_1083_17
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21475..21903)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CMF1_SYNLT
Uncharacterized protein {ECO:0000313|EMBL:KDO99060.1}; TaxID=1402966 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
hypothetical protein
BD02T64_scaffold_1083_18
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21948..23129)
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X745_9PSEU
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHR53513.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina
thiolase
BD02T64_scaffold_1083_19
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23472..24524)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E5E2E7
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:GAJ41150.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus N
alcohol dehydrogenase GroES
BD02T64_scaffold_1083_20
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24651..25874)
DNA (1224bp) protein (408aa)
serB; phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like) n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIG5_NEPCE
Phosphoserine phosphatase {ECO:0000313|EMBL:KJS09017.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1083_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26002..27351
DNA (1350bp) protein (450aa)
Membrane protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JEJ5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KJS09018.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
sensor with HAMP domain
BD02T64_scaffold_1083_22
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27362..28132)
DNA (771bp) protein (257aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KPB0_SIMAS rbh
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AFV00867.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JC
BD02T64_scaffold_1083_23
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28260..29939)
DNA (1680bp) protein (560aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NX93_9GAMM
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EHQ57769.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteoba
AMP-binding protein
BD02T64_scaffold_1083_24
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30173..30577
DNA (405bp) protein (135aa)
Transcriptional regulator, putative n=1 Tax=gamma proteobacterium HTCC2207 PF8_9GAMM">RepID=Q1YPF8_9GAMM
Transcriptional regulator, putative {ECO:0000313|EMBL:EAS46077.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207
MerR family transcriptional regulator
BD02T64_scaffold_1083_25
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30618..31787
DNA (1170bp) protein (390aa)
isovaleryl-CoA dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B6B8FE
isovaleryl-CoA dehydrogenase
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:AFU99193.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881
BD02T64_scaffold_1083_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32016..32903
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000381AAD8
putative short-chain dehydrogenase
Putative short-chain dehydrogenase {ECO:0000313|EMBL:CAY51034.1}; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
BD02T64_scaffold_1083_27
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32952..34559
DNA (1608bp) protein (536aa)
Methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
Methylcrotonoyl-CoA carboxylase n=3 Tax=Glaciecola RepID=F4AHZ1_GLAS4
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KJE38772.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomon
BD02T64_scaffold_1083_28
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34671..36647
DNA (1977bp) protein (659aa)
Carbamoyl-phosphate synthase L chain, ATP binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S162_9GAMM
Carbamoyl-phosphate synthase L chain, ATP binding domain protein {ECO:0000313|EMBL:EEB77602.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="ma
methylcrotonyl-CoA carboxylase subunit alpha
BD02T64_scaffold_1083_29
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36808..37722
DNA (915bp) protein (305aa)
HMGL-like, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S161_9GAMM
HMGL-like, putative {ECO:0000313|EMBL:EEB77603.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hydroxymethylglutaryl-CoA lyase
BD02T64_scaffold_1083_30
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38325..39674
DNA (1350bp) protein (450aa)
Diguanylate cyclase n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SZ61_PSYIN
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABM04776.1}; Flags: Precursor;; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="P
Displaying items 1-30 of 32 in total

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