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BD02T64_scaffold_1170

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1170_1
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1733)
DNA (1731bp) protein (577aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KM52_SHEWM
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ACA84465.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
methyl-accepting chemotaxis protein
BD02T64_scaffold_1170_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1850..4096)
DNA (2247bp) protein (749aa)
Chemotaxis protein CheA {ECO:0000313|EMBL:GAO37382.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
cheA; two-component system, chemotaxis family, sensor kinase id=12494862 bin=THIO_HI species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
CheA signal transduction histidine kinase
BD02T64_scaffold_1170_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4157..4477)
DNA (321bp) protein (107aa)
Anti-sigma-factor antagonist n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T185_META2
Anti-sigma-factor antagonist
Anti-sigma-factor antagonist {ECO:0000313|EMBL:CCE24608.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylo
BD02T64_scaffold_1170_4
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..4882)
DNA (369bp) protein (123aa)
chemotaxis protein CheY n=1 Tax=Pseudomonas extremaustralis RepID=UPI000288429C
Chemotaxis protein CheY {ECO:0000313|EMBL:EZI25021.1}; TaxID=1117958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extre
chemotaxis protein CheY
BD02T64_scaffold_1170_5
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4892..6088)
DNA (1197bp) protein (399aa)
methyl-accepting chemotaxis protein n=1 Tax=Aeromonas sp. 159 RepID=UPI000316A25B
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ERF64884.1}; TaxID=1347420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas v
methyl-accepting chemotaxis protein
BD02T64_scaffold_1170_6
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6516..7055
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000368E2C8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL20525.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
BD02T64_scaffold_1170_7
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7052..8587
DNA (1536bp) protein (512aa)
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W0X0_MAGSA
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAE52505.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source=
BD02T64_scaffold_1170_8
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8686..10233
DNA (1548bp) protein (516aa)
ABC-1 domain-containing protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J142_9GAMM
ABC-1 domain-containing protein {ECO:0000313|EMBL:EGW20914.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylob
ABC transporter
BD02T64_scaffold_1170_9
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10435..13002
DNA (2568bp) protein (856aa)
DNA mismatch repair protein MutS n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PJZ4_CELJU
mutS; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadacea
BD02T64_scaffold_1170_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13088..13411
DNA (324bp) protein (108aa)
Ferredoxin I n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR84_9GAMM
Ferredoxin {ECO:0000313|EMBL:KJS04359.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ferredoxin-1
BD02T64_scaffold_1170_11
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..14428)
DNA (975bp) protein (325aa)
RNA polymerase sigma factor n=1 Tax=Gilvimarinus chinensis RepID=UPI00037F7279
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=314283 species="Bacteria; Proteobacteri
RNA polymerase sigma factor RpoS
BD02T64_scaffold_1170_12
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14667..15308)
DNA (642bp) protein (214aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YAX1_THIV6
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:AFL74139.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" so
BD02T64_scaffold_1170_13
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15386..16330)
DNA (945bp) protein (315aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" sou
Pseudouridine synthase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTQ7_9GAMM
ribosomal large subunit pseudouridine synthase C
BD02T64_scaffold_1170_14
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17086..20145
DNA (3060bp) protein (1020aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1411685 species="Bacteria; Proteobacteria; Ga
RNAse E (EC:3.1.4.-)
Ribonuclease E n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTQ8_9GAMM rbh
BD02T64_scaffold_1170_15

Not on your lists

20693..21784
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06428.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
hypothetical protein
BD02T64_scaffold_1170_16
Cobetia marina, Cobetia, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22166..23215)
DNA (1050bp) protein (350aa)
UDP-glucose 4-epimerase/UDP-N-acetylglucosamine 4-epimerase n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8ANS8_PLESH
Uncharacterized protein {ECO:0000313|EMBL:KGA00805.1}; TaxID=28258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Cobetia.;" source="Cobetia marina (Deleya
UDP-galactose-4-epimerase
BD02T64_scaffold_1170_17
Acinetobacter sp. ANC 3789, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23379..24461
DNA (1083bp) protein (361aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1217714 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Morax
dTDP-glucose 4,6-dehydratase n=1 Tax=Acinetobacter sp. ANC 3789 RepID=N8VES7_9GAMM
dTDP-glucose 4,6-dehydratase
BD02T64_scaffold_1170_18
CG_Gallio_01, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24458..25354
DNA (897bp) protein (299aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Gallio_01
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Pseudomonas tolaasii RepID=UPI0002FE229A rbh
BD02T64_scaffold_1170_19
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25396..26280
DNA (885bp) protein (295aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophil
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZR1_METFK rbh
BD02T64_scaffold_1170_20
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26319..26876
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ACL73422.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ACL73422.1};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectot
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000367A0C4
BD02T64_scaffold_1170_21
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26961..28871
DNA (1911bp) protein (637aa)
asparagine synthase (EC:6.3.5.4)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE12 RepID=UPI00035EB17F
Asparagine synthase {ECO:0000313|EMBL:AKH22043.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
BD02T64_scaffold_1170_22
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28890..29282)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZSY5_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ16622.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
BD02T64_scaffold_1170_23
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29365..32466)
DNA (3102bp) protein (1034aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034C519E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23698.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
Displaying 23 items

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