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BD02T64_scaffold_1281

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1281_1
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..2001)
DNA (1446bp) protein (482aa)
GTP-binding protein Der n=1 Tax=Gilvimarinus chinensis RepID=UPI00035EE40B rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobact
engA; GTP-binding protein EngA
BD02T64_scaffold_1281_2
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2152..3381)
DNA (1230bp) protein (410aa)
Outer membrane protein assembly factor BamB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP32_9GAMM
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source=
bamB; Outer membrane protein assembly factor BamB
BD02T64_scaffold_1281_3
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3378..4109)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP33_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAS46013.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
hypothetical protein
BD02T64_scaffold_1281_4
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4228..5496)
DNA (1269bp) protein (423aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthetase n=1 Tax=Microbulbifer variabilis RepID=UPI000373322C rbh
histidyl-tRNA synthetase
BD02T64_scaffold_1281_5
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5512..6642)
DNA (1131bp) protein (377aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558DDE
BD02T64_scaffold_1281_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6738..7634)
DNA (897bp) protein (299aa)
type IV pilus biogenesis/stability protein PilW n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558DDC rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS08719.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
type IV pilus biogenesis protein PilF
BD02T64_scaffold_1281_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7670..8863)
DNA (1194bp) protein (398aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
50S rRNA methyltransferase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558DDB
radical SAM enzyme, Cfr family protein
BD02T64_scaffold_1281_8
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8900..9325)
DNA (426bp) protein (142aa)
ndk; nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=NDK_ALCBS rbh
BD02T64_scaffold_1281_9
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9428..11521)
DNA (2094bp) protein (698aa)
Sensory box/GGDEF domain/EAL domain protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP39_9GAMM
Bacteriophytochrome cph2 {ECO:0000313|EMBL:ETN92130.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
diguanylate cyclase/phosphodiesterase
BD02T64_scaffold_1281_10
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11583..11783)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6UX01_9PSED
FeS assembly protein IscX {ECO:0000313|EMBL:KHF24909.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
hypothetical protein
BD02T64_scaffold_1281_11
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11819..12157)
DNA (339bp) protein (113aa)
2Fe-2S ferredoxin n=1 Tax=Leucothrix mucor RepID=UPI0003B77705
2Fe-2S ferredoxin {ECO:0000313|EMBL:KES20912.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
ferredoxin
BD02T64_scaffold_1281_12
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12159..14012)
DNA (1854bp) protein (618aa)
Chaperone protein HscA homolog n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP42_9GAMM
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
hscA; chaperone protein HscA
BD02T64_scaffold_1281_13
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14095..14595)
DNA (501bp) protein (167aa)
Co-chaperone protein HscB homolog n=1 Tax=Agarivorans albus MKT 106 RepID=R9PSY2_AGAAL
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Aga
co-chaperone Hsc20
BD02T64_scaffold_1281_14
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..14985)
DNA (324bp) protein (108aa)
iron-sulfur cluster assembly protein n=1 Tax=Marinobacterium stanieri RepID=UPI00025577CB
Iron-binding protein IscA {ECO:0000256|SAAS:SAAS00037071}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
iscA; putative iron-sulfur cluster insertion protein erpA
BD02T64_scaffold_1281_15
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15018..15404)
DNA (387bp) protein (129aa)
FeS cluster assembly scaffold IscU n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558A5C
NifU-like protein {ECO:0000313|EMBL:ETN92124.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
scaffold protein
BD02T64_scaffold_1281_16
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15507..16721)
DNA (1215bp) protein (405aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1232683 species="Bacteri
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP46_9GAMM
BD02T64_scaffold_1281_17
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16804..17301)
DNA (498bp) protein (166aa)
transcriptional regulator n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037D1756
Rrf2 family protein
Transcriptional regulator {ECO:0000313|EMBL:KJS08699.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1281_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17426..18226)
DNA (801bp) protein (267aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Cellvibrio sp. BR RepID=I3IBQ7_9GAMM
TrmH family RNA methyltransferase
BD02T64_scaffold_1281_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18377..19180
DNA (804bp) protein (268aa)
suhB; extragenic suppressor protein SuhB (EC:3.1.3.25)
Extragenic suppressor protein SuhB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP49_9GAMM
Inositol monophosphatase {ECO:0000313|EMBL:KJS08697.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1281_20
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19295..20056
DNA (762bp) protein (254aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LF27_9GAMM
ubiquinone/menaquinone biosynthesis methyltransferase UbiE
BD02T64_scaffold_1281_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20053..20643
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FGH5_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJS08694.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_1281_22
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20654..22291
DNA (1638bp) protein (546aa)
ubiB; 2-polyprenylphenol 6-hydroxylase (EC:1.14.13.-)
Probable protein kinase UbiB n=1 Tax=Cellvibrio sp. BR RepID=I3IDM9_9GAMM
Ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:KJS08693.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1281_23
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22355..22762
DNA (408bp) protein (136aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Marinobacter lipolyticus RepID=UPI000374CBC2 rbh
hisI; phosphoribosyl-AMP cyclohydrolase
BD02T64_scaffold_1281_24
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22782..23114
DNA (333bp) protein (111aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Cellvibrio sp. BR RepID=I3I6C7_9GAMM rbh
BD02T64_scaffold_1281_25
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23169..23438
DNA (270bp) protein (90aa)
Sec-independent protein translocase protein TatA n=1 Tax=Reinekea blandensis MED297 RepID=A4B9U9_9GAMM
tatA; twin arginine-targeting protein translocase, TatA/E family
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.
BD02T64_scaffold_1281_26
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23487..23975
DNA (489bp) protein (163aa)
Sec-independent protein translocase protein TatB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQZ4_9GAMM
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92
TatB
BD02T64_scaffold_1281_27
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24063..24806
DNA (744bp) protein (248aa)
Sec-independent protein translocase protein TatC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z8H1_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma p
twin-arginine protein translocation system subunit TatC
BD02T64_scaffold_1281_28
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24904..25308)
DNA (405bp) protein (135aa)
Cyclic diguanosine monophosphate-binding protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VME8_9GAMM
hypothetical protein
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIR
BD02T64_scaffold_1281_29
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25369..26490)
DNA (1122bp) protein (374aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1632857 species="Bacteria; Proteobacteria; Betap
UPI0003D59990 related cluster n=1 Tax=unknown RepID=UPI0003D59990
chemotaxis protein CheY
BD02T64_scaffold_1281_30
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26527..26994)
DNA (468bp) protein (156aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BIY6_TERTT
chemotaxis protein, stimulates methylation of MCP protein
Displaying items 1-30 of 33 in total

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