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BD02T64_scaffold_1861

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1861_1
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2043
DNA (2043bp) protein (681aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRA7_9GAMM
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EAS46701.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC220
BD02T64_scaffold_1861_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2018..2857
DNA (840bp) protein (280aa)
Formate dehydrogenase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QDS6_RALPI rbh
formate dehydrogenase
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
BD02T64_scaffold_1861_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2887..3105
DNA (219bp) protein (73aa)
NAD-dependent formate dehydrogenase subunit delta {ECO:0000313|EMBL:ESX81370.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;"
BD02T64_scaffold_1861_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3150..5036)
DNA (1887bp) protein (629aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KR89_9BURK
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
BD02T64_scaffold_1861_5
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..5645)
DNA (417bp) protein (139aa)
PF11220 family protein n=6 Tax=Leptospira interrogans RepID=K6F055_LEPIR
Uncharacterized protein {ECO:0000313|EMBL:KJS33118.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
hypothetical protein
BD02T64_scaffold_1861_6
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5746..9573)
DNA (3828bp) protein (1276aa)
Signal transduction histidine kinase n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UX43_9GAMM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFT67131.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="C
BD02T64_scaffold_1861_7
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9781..11157)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Glaciecola RepID=F4ATG5_GLAS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE24498.1}; TaxID=983545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola sp. (str
BD02T64_scaffold_1861_8
uncultured Chromatiales bacterium HF0200_41F04, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11220..13580)
DNA (2361bp) protein (787aa)
Putative uncharacterized protein n=1 Tax=uncultured Chromatiales bacterium HF0200_41F04 RepID=E0XV08_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18249.1}; TaxID=710740 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; environmental samples.;" source="uncultured Chromatia
BD02T64_scaffold_1861_9
uncultured Chromatiales bacterium HF0200_41F04, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13580..14692)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=uncultured Chromatiales bacterium HF0200_41F04 RepID=E0XV09_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18250.1}; TaxID=710740 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; environmental samples.;" source="uncultured Chromatia
hypothetical protein
BD02T64_scaffold_1861_10

Not on your lists

comp(14692..15105)
DNA (414bp) protein (138aa)
biopolymer transporter ExbD n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B5C367
Uncharacterized protein {ECO:0000313|EMBL:KKO08294.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
biopolymer transport protein ExbD/TolR
BD02T64_scaffold_1861_11
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15108..15509)
DNA (402bp) protein (134aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6M1_9GAMM
Biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ADC70954.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" sou
BD02T64_scaffold_1861_12
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15526..16149)
DNA (624bp) protein (208aa)
Histidine ammonia-lyase protein {ECO:0000313|EMBL:ERJ19141.1}; EC=4.3.1.3 {ECO:0000313|EMBL:ERJ19141.1};; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salini
Histidine ammonia-lyase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2E5T5_9GAMM
biopolymer transport protein
BD02T64_scaffold_1861_13
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16276..16740)
DNA (465bp) protein (155aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRN0_9GAMM
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EGW23649.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;
glutathione-dependent formaldehyde-activating protein
BD02T64_scaffold_1861_14
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16803..17678)
DNA (876bp) protein (292aa)
LysR, substrate-binding n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21DJ7_SACD2
LysR, substrate-binding
LysR, substrate-binding {ECO:0000313|EMBL:ABD83232.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus
BD02T64_scaffold_1861_15
unknown

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17815..17964
DNA (150bp) protein (50aa)

This feature has no annotations

BD02T64_scaffold_1861_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18626..19759)
DNA (1134bp) protein (378aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10 1.3.8.1)
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB84226.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB84226.1};; EC=1.3.99.10 {ECO:0000313|EMBL:AEB84226.1};; TaxID=596154 species="Bac
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6B7_ALIDK rbh
BD02T64_scaffold_1861_17
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19842..20990)
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HZY5_9GAMM rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN77101.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rub
acyl-CoA dehydrogenase-like protein
BD02T64_scaffold_1861_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21082..22209)
DNA (1128bp) protein (376aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10 1.3.8.1)
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB84226.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB84226.1};; EC=1.3.99.10 {ECO:0000313|EMBL:AEB84226.1};; TaxID=596154 species="Bac
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6B7_ALIDK
BD02T64_scaffold_1861_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22305..22712)
DNA (408bp) protein (136aa)
Ferric-uptake regulator n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21H33_SACD2
Fur family transcriptional regulator {ECO:0000313|EMBL:KJS09963.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ferric-uptake regulator
BD02T64_scaffold_1861_20
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22783..23187
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000372E12E
SmpA/OmlA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
membrane protein
BD02T64_scaffold_1861_21
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23205..23585)
DNA (381bp) protein (127aa)
UPF0125 protein Sde_2738 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21H31_SACD2
protein of unknown function UPF0125
UPF0125 protein Sde_2738 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharoph
BD02T64_scaffold_1861_22
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23646..24095)
DNA (450bp) protein (150aa)
Oligoketide cyclase/lipid transport protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5S1_9GAMM
Toxin RatA {ECO:0000313|EMBL:ETN92008.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
cyclase/dehydrase
BD02T64_scaffold_1861_23
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24107..25429)
DNA (1323bp) protein (441aa)
Transporter n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQL0_9GAMM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
sodium:neurotransmitter symporter
BD02T64_scaffold_1861_24
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25614..26093
DNA (480bp) protein (160aa)
SsrA-binding protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQL1_9GAMM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma prot
smpB; SsrA-binding protein
Displaying 24 items

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