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BD02T64_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 335 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_21_1
unknown

Not on your lists

71..358
DNA (288bp) protein (96aa)

This feature has no annotations

BD02T64_scaffold_21_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(506..1660)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA300-J04 RepID=UPI0003786EE3 rbh
MFS transporter {ECO:0000313|EMBL:KKB76368.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
major facilitator transporter
BD02T64_scaffold_21_3
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2067..2570
DNA (504bp) protein (168aa)
UPI0003D6B541 related cluster n=1 Tax=unknown RepID=UPI0003D6B541 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD03034.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methyloh
BD02T64_scaffold_21_4
Rhodobacterales bacterium Y4I, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2733..3062
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BAW7_9RHOB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ46706.1}; TaxID=439496 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium Y4I.;"
BD02T64_scaffold_21_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3206..3499)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI0003774826
Uncharacterized protein {ECO:0000313|EMBL:ETX05575.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
BD02T64_scaffold_21_6
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3640..4299
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000378A620 rbh
Uncharacterized protein {ECO:0000313|EMBL:KAJ54732.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
HxlR family transcriptional regulator
BD02T64_scaffold_21_7
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4459..5271)
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JIH3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL62250.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" so
hypothetical protein
BD02T64_scaffold_21_8
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5351..5689)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K7AXB7_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH43664.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_21_9
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5698..6495)
DNA (798bp) protein (266aa)
UPI0003CE0C8D related cluster n=1 Tax=unknown RepID=UPI0003CE0C8D
Bb3-type cytochrome oxidase subunit IV {ECO:0000313|EMBL:ESX50168.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
cytochrome C oxidase subunit III
BD02T64_scaffold_21_10
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6476..7135)
DNA (660bp) protein (220aa)
cytochrome C oxidase; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002E2EF97
cytochrome c oxidase subunit III
BD02T64_scaffold_21_11
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7132..8874)
DNA (1743bp) protein (581aa)
cytochrome C oxidase n=1 Tax=Hahella ganghwensis RepID=UPI0003661637
Cytochrome C oxidase {ECO:0000313|EMBL:ERI53955.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-
coxA; cytochrome c oxidase, subunit I
BD02T64_scaffold_21_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8930..9760)
DNA (831bp) protein (277aa)
cytochrome-c oxidase subunit 2 protein (EC:1.9.3.1)
Cytochrome-c oxidase subunit 2 protein {ECO:0000313|EMBL:AJD42666.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AJD42666.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhiz
cytochrome C oxidase n=1 Tax=Rhizobium mongolense RepID=UPI0003B347DE
BD02T64_scaffold_21_13
unknown

Not on your lists

comp(10207..10434)
DNA (228bp) protein (76aa)

This feature has no annotations

BD02T64_scaffold_21_14
unknown

Not on your lists

10504..11439
DNA (936bp) protein (312aa)
putative glycosyl transferase (EC:2.4.1.-)
BD02T64_scaffold_21_15
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11436..13034)
DNA (1599bp) protein (533aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DIQ5_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00046.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
BD02T64_scaffold_21_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(13053..13964)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000365900A rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:EDY20285.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
family 2 glycosyl transferase
BD02T64_scaffold_21_17
unknown

Not on your lists

comp(13946..14143)
DNA (198bp) protein (66aa)

This feature has no annotations

BD02T64_scaffold_21_18
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14532..15806)
DNA (1275bp) protein (425aa)
fuconate dehydratase n=1 Tax=Leucothrix mucor RepID=UPI0003B6A82C
mandelate racemase/muconate lactonizing-like protein rbh
Mandelate racemase/muconate lactonizing enzyme-like protein {ECO:0000313|EMBL:ABF62363.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruege
BD02T64_scaffold_21_19
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15806..16648)
DNA (843bp) protein (281aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPQ4_9RHOB
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:EBA18446.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;"
fumarylacetoacetate hydrolase family protein rbh
BD02T64_scaffold_21_20
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16668..17417)
DNA (750bp) protein (250aa)
3-hydroxybutyrate dehydrogenase type 2 {ECO:0000313|EMBL:EEA92184.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EEA92184.1};; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
3-hydroxybutyrate dehydrogenase type 2 n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R975_9RHOB rbh
short chain dehydrogenase/reductase family oxidoreductase rbh
BD02T64_scaffold_21_21
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17422..17751)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GLV0_RUEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF62366.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain
BD02T64_scaffold_21_22
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17751..18863)
DNA (1113bp) protein (371aa)
Mandelate racemase/muconate lactonizing enzyme-like protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GLU9_RUEST
mandelate racemase/muconate lactonizing-like protein
Mandelate racemase/muconate lactonizing enzyme-like protein {ECO:0000313|EMBL:ABF62367.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruege
BD02T64_scaffold_21_23
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18867..19958)
DNA (1092bp) protein (364aa)
Sugar ABC transporter, ATP-binding protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPQ0_9RHOB
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA18442.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source=
ABC transporter
BD02T64_scaffold_21_24
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19963..20826)
DNA (864bp) protein (288aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GLU7_RUEST rbh
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABF62369.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
BD02T64_scaffold_21_25
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20831..21727)
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPP8_9RHOB
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EBA18440.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
binding-protein-dependent transport systems inner membrane component rbh
BD02T64_scaffold_21_26
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21806..23119)
DNA (1314bp) protein (438aa)
Sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPP7_9RHOB
Sugar ABC transporter, periplasmic sugar-binding protein {ECO:0000313|EMBL:EBA18439.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobac
extracellular solute-binding protein
BD02T64_scaffold_21_27
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23262..24074
DNA (813bp) protein (271aa)
Putative IclR transcriptional regulator protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPP5_9RHOB
Putative IclR transcriptional regulator protein {ECO:0000313|EMBL:EBA18437.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" so
IclR family transcriptional regulator
BD02T64_scaffold_21_28
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24071..25093
DNA (1023bp) protein (341aa)
aldo/keto reductase n=1 Tax=Ruegeria conchae RepID=UPI0002379CE1
Pyridoxal 4-dehydrogenase {ECO:0000313|EMBL:KIC37069.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R
oxidoreductase, aldo/keto reductase family
BD02T64_scaffold_21_29
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25096..25926
DNA (831bp) protein (277aa)
Hydrolase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EPP4_9RHOB rbh
Hydrolase {ECO:0000313|EMBL:EBA18436.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
amidohydrolase 2 rbh
BD02T64_scaffold_21_30
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25962..26849)
DNA (888bp) protein (296aa)
dienelactone hydrolase n=1 Tax=Loktanella vestfoldensis RepID=UPI00036183F4 rbh
Dienelactone hydrolase {ECO:0000313|EMBL:KHQ51428.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UM
Dienelactone hydrolase family rbh
Displaying items 1-30 of 335 in total

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