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BD02T64_scaffold_34

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Displaying items 1-30 of 254 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_34_1
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(474..1517)
DNA (1044bp) protein (348aa)
integrase n=1 Tax=Ruegeria conchae RepID=UPI0002379C5F
Integrase {ECO:0000313|EMBL:KGL01317.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR
phage integrase
BD02T64_scaffold_34_2
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1884..3542)
DNA (1659bp) protein (553aa)
iron ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002559C7B
Ferric iron ABC transporter, permease protein {ECO:0000313|EMBL:EPX85632.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" sourc
binding-protein-dependent transport systems inner membrane component
BD02T64_scaffold_34_3
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3601..3774)
DNA (174bp) protein (58aa)
Nitrogen fixation protein fixS n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQC8_DINSH
fixS; nitrogen fixation protein fixS
Nitrogen fixation protein fixS {ECO:0000313|EMBL:ABV92414.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoros
BD02T64_scaffold_34_4
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3771..5978)
DNA (2208bp) protein (736aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EEX09496.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EEX09496.1};; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
Copper-translocating P-type ATPase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CUH3_9RHOB
heavy metal translocating P-type ATPase
BD02T64_scaffold_34_5
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5971..6447)
DNA (477bp) protein (159aa)
RdxH n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EN87_9RHOB
FixH family protein {ECO:0000313|EMBL:KCV81217.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlan
fixH; nitrogen fixation protein fixH
BD02T64_scaffold_34_6
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6444..7886)
DNA (1443bp) protein (481aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9S5U3_9RHOB
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation {ECO:0000313|EMBL:EPX85545.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
iron-sulfur-binding protein, RdxA/RdxB/FixG family
BD02T64_scaffold_34_7
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..8933)
DNA (876bp) protein (292aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Roseobacter sp. MED193 RepID=A3XC95_9RHOB
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="L
cytochrome CBB3
BD02T64_scaffold_34_8
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8938..9096)
DNA (159bp) protein (53aa)
UPI0003D1A5C8 related cluster n=1 Tax=unknown RepID=UPI0003D1A5C8
Contig14, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50406.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
cccQ; cytochrome c oxidase subunit 4
BD02T64_scaffold_34_9
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9108..9833)
DNA (726bp) protein (242aa)
fixO; cbb3-type cytochrome c oxidase subunit II (EC:1.9.3.1)
Cytochrome c oxidase {ECO:0000313|EMBL:ABV92408.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABV92408.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; D
Cytochrome c oxidase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQC2_DINSH
BD02T64_scaffold_34_10
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9849..11438)
DNA (1590bp) protein (530aa)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:EEE38157.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EEE38157.1};; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterale
fixN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NLZ3_9RHOB
BD02T64_scaffold_34_11
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11661..12410)
DNA (750bp) protein (250aa)
Transcriptional activator protein FnrL n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FW81_9RHOB
Transcriptional activator protein FnrL {ECO:0000313|EMBL:EDM69556.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ros
fnrL; transcriptional activator protein FnrL
BD02T64_scaffold_34_12
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12733..13860
DNA (1128bp) protein (376aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase n=1 Tax=Citreicella sp. 357 RepID=I1B2Z1_9RHOB
BD02T64_scaffold_34_13
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14253..15257)
DNA (1005bp) protein (335aa)
UPI0003D6B410 related cluster n=1 Tax=unknown RepID=UPI0003D6B410
Hint domain protein
Plasmid pGal_A255, complete sequence {ECO:0000313|EMBL:AHD11538.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phae
BD02T64_scaffold_34_14
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15417..17780)
DNA (2364bp) protein (788aa)
Aldehyde dehydrogenase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VEY1_9RHOB
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGM49711.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II
aldehyde dehydrogenase
BD02T64_scaffold_34_15
Ruegeria sp. R11, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17785..18741)
DNA (957bp) protein (319aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=439497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
Deoxyribose-phosphate aldolase n=1 Tax=Ruegeria sp. R11 RepID=B7QSP2_9RHOB
deoxyribose-phosphate aldolase
BD02T64_scaffold_34_16
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18738..20048)
DNA (1311bp) protein (437aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
Thymidine phosphorylase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NS74_9RHOB rbh
pdp; pyrimidine-nucleoside phosphorylase
BD02T64_scaffold_34_17
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20048..20857)
DNA (810bp) protein (270aa)
punA; purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=272942 species="Bac
Purine nucleoside phosphorylase n=1 Tax=Rhodobacter capsulatus YW1 RepID=V8GXE1_RHOCA rbh
BD02T64_scaffold_34_18
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21070..21615
DNA (546bp) protein (182aa)
Peptide synthase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NRV6_9RHOB rbh
Peptide synthase {ECO:0000313|EMBL:EEE37326.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
hypothetical protein
BD02T64_scaffold_34_19
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21654..23069)
DNA (1416bp) protein (472aa)
GTPase Der n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FP34_9RHOB
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobac
GTP-binding protein Der
BD02T64_scaffold_34_20
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23139..24461)
DNA (1323bp) protein (441aa)
Pyrrolo-quinoline quinone n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DDZ4_9RHOB
Pyrrolo-quinoline quinone
Tax=BJP_IG2158_Rhodobacterales_64_37
BD02T64_scaffold_34_21
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24507..25163)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CHP7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR52247.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulos
hypothetical protein DUF2133
BD02T64_scaffold_34_22
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25424..26506
DNA (1083bp) protein (361aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DDZ2_9RHOB
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EET47552.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" sourc
hemolysin D
BD02T64_scaffold_34_23
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26506..29991
DNA (3486bp) protein (1162aa)
Acriflavin resistance protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LHV7_DINSH rbh
Acriflavin resistance protein {ECO:0000313|EMBL:ABV92904.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinorose
acriflavin resistance protein
BD02T64_scaffold_34_24
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30118..30477
DNA (360bp) protein (120aa)
Preprotein translocase, SecG subunit n=1 Tax=Rhodobacter sp. SW2 RepID=C8S071_9RHOB
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KAJ54175.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Act
Preprotein translocase subunit SecG
BD02T64_scaffold_34_25
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30845..31396)
DNA (552bp) protein (184aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.-)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMC2_9PROT
Tax=BJP_IG2158_Rhodobacterales_69_12
BD02T64_scaffold_34_26
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31533..32900
DNA (1368bp) protein (456aa)
Sodium/hydrogen exchanger n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D728_9RHOB
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EET47210.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobium sp
putative sodium/hydrogen exchanger
BD02T64_scaffold_34_27
unknown

Not on your lists

32901..33041
DNA (141bp) protein (47aa)

This feature has no annotations

BD02T64_scaffold_34_28
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

33054..33287
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:CAD75242.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
BD02T64_scaffold_34_29
unknown

Not on your lists

33253..33510
DNA (258bp) protein (86aa)

This feature has no annotations

BD02T64_scaffold_34_30
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33603..34013
DNA (411bp) protein (137aa)
Ferric uptake regulation protein Fur n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DZI8_PHAIB
Fur family transcriptional regulator {ECO:0000313|EMBL:KIC20760.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisi
fur; ferric uptake regulation protein Fur
Displaying items 1-30 of 254 in total

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