ggKbase home page

BD02T64_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 241 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_40_1
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..2309)
DNA (1428bp) protein (476aa)
Capsule polysaccharide export n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LPK7_DINSH
kpsE; capsule polysaccharide export
Capsule polysaccharide export {ECO:0000313|EMBL:ABV92330.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinorose
BD02T64_scaffold_40_2
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2302..2955)
DNA (654bp) protein (218aa)
Capsular polysaccharide ABC transporter, ATP-binding protein KpsT n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QB54_9RHOB
ABC transporter {ECO:0000313|EMBL:KDB05424.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17
capsule polysaccharide export ATP-binding protein KpsT
BD02T64_scaffold_40_3
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3166..3648
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA02313.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC
cation antiporter
BD02T64_scaffold_40_4
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..3935
DNA (291bp) protein (97aa)
Multiple resistance and pH regulation protein F n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD2_9RHOB rbh
Multiple resistance and pH regulation protein F {ECO:0000313|EMBL:EBA02314.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodoba
multiple resistance and pH regulation protein F
BD02T64_scaffold_40_5
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3932..4306
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA02315.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC
monovalent cation/proton antiporter subunit MnhG/PhaG
BD02T64_scaffold_40_6
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4353..4883
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD4_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA02316.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC
putative multicomponent Na+-H+ antiporter subunit A
BD02T64_scaffold_40_7
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4883..5323
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD5_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA02317.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC
putative monovalent cation/H+ antiporter subunit B
BD02T64_scaffold_40_8
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5323..5760
DNA (438bp) protein (146aa)
NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD6_9RHOB rbh
NADH-ubiquinone oxidoreductase, chain 4L {ECO:0000313|EMBL:EBA02318.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
NADH-ubiquinone oxidoreductase chain 4L
BD02T64_scaffold_40_9
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5760..7283
DNA (1524bp) protein (508aa)
NADH dehydrogenase/oxidoreductase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD7_9RHOB rbh
NADH dehydrogenase/oxidoreductase {ECO:0000313|EMBL:EBA02319.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bact
putative monovalent cation/H+ antiporter subunit D
BD02T64_scaffold_40_10
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7287..8756
DNA (1470bp) protein (490aa)
Putative NADH-ubiquinone oxidoreductase subunit n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD8_9RHOB rbh
Putative NADH-ubiquinone oxidoreductase subunit {ECO:0000313|EMBL:EBA02320.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodoba
NADH dehydrogenase (quinone)
BD02T64_scaffold_40_11
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8766..9110
DNA (345bp) protein (115aa)
Hydrogenase membrane subunit n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVD9_9RHOB rbh
Hydrogenase membrane subunit {ECO:0000313|EMBL:EBA02321.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium
hypothetical protein
BD02T64_scaffold_40_12
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9103..10800
DNA (1698bp) protein (566aa)
NADH dehydrogenase subunit N n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JVE0_9RHOB rbh
NADH dehydrogenase subunit N {ECO:0000313|EMBL:EBA02322.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium
putative monovalent cation/H+ antiporter subunit D
BD02T64_scaffold_40_13
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10809..11585
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B955_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGB81919.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
hypothetical protein
BD02T64_scaffold_40_14
unknown

Not on your lists

comp(11582..12016)
DNA (435bp) protein (145aa)

This feature has no annotations

BD02T64_scaffold_40_15
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12080..13468)
DNA (1389bp) protein (463aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4UX80_9RHOB
Transporter {ECO:0000313|EMBL:KGB82747.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
putative outer membrane protein tolC
BD02T64_scaffold_40_16
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13537..14190)
DNA (654bp) protein (218aa)
pcm-1; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Roseovarius sp. 217 RepID=A3VXK8_9RHOB
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:EAQ27188.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source=
BD02T64_scaffold_40_17
unknown

Not on your lists

comp(15867..16283)
DNA (417bp) protein (139aa)

This feature has no annotations

BD02T64_scaffold_40_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16632..17762
DNA (1131bp) protein (377aa)
Multicopper oxidase, type 3 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6M9_9RHIZ
Copper oxidase {ECO:0000313|EMBL:KKB84685.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative copper oxidase
BD02T64_scaffold_40_19
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17723..18940
DNA (1218bp) protein (406aa)
Putative metal cation transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YJR2_9RHIZ
Putative metal cation transporter {ECO:0000313|EMBL:EHH04572.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
metal cation transporter
BD02T64_scaffold_40_20
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19015..20010)
DNA (996bp) protein (332aa)
UPI0003D6D0D2 related cluster n=1 Tax=unknown RepID=UPI0003D6D0D2 rbh
Zn-dependent hydrolase rbh
Uncharacterized protein {ECO:0000313|EMBL:AHD09155.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter galla
BD02T64_scaffold_40_21
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20367..20768
DNA (402bp) protein (134aa)
bleomycin resistance protein n=1 Tax=Ponticaulis koreensis RepID=UPI0003B64737 rbh
Uncharacterized protein {ECO:0000313|EMBL:KAJ55654.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium m
glyoxalase
BD02T64_scaffold_40_22
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20983..21999)
DNA (1017bp) protein (339aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT (EC:2.4.2.21)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B449B8
BD02T64_scaffold_40_23
Rhodobacterales bacterium HTCC2255, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22081..22848
DNA (768bp) protein (256aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
cobS1; cobalamin-5-phosphate synthase CobS (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FF43_9RHOB rbh
BD02T64_scaffold_40_24

Not on your lists

comp(22889..23410)
DNA (522bp) protein (174aa)
Putative transcriptional regulator, CarD family n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZH10_ROSLO
CarD family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KKM87718.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_40_25
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23606..23944)
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QJV1_9RHOB
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:EPX79878.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;"
fdxA; ferredoxin II
BD02T64_scaffold_40_26
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24027..24398)
DNA (372bp) protein (124aa)
RNA-binding S4 n=1 Tax=Ruegeria sp. R11 RepID=B7QR48_9RHOB
tRNA synthetase RNA-binding protein {ECO:0000313|EMBL:KGB82256.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodov
heat shock protein
BD02T64_scaffold_40_27
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24406..27135)
DNA (2730bp) protein (910aa)
Helicase-like protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2III4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGB82257.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
helicase, putative
BD02T64_scaffold_40_28
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27151..27717)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RP56_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX79875.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter a
hypothetical protein
BD02T64_scaffold_40_29
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27836..28126
DNA (291bp) protein (97aa)
Sterol carrier family protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B215_9RHOB
Sterol carrier family protein {ECO:0000313|EMBL:KEJ98130.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitoba
sterol-binding domain-containing protein
BD02T64_scaffold_40_30
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28126..29055
DNA (930bp) protein (310aa)
Lysophospholipase L2 {ECO:0000313|EMBL:EPX79873.1}; EC=3.1.1.5 {ECO:0000313|EMBL:EPX79873.1};; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
hydrolase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B5206F
hypothetical protein
Displaying items 1-30 of 241 in total

View Taxonomy