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BD02T64_scaffold_326

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_326_1
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..270
DNA (270bp) protein (90aa)
Putative IS110 family transposase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RIG2_9RHOB
putative IS110 family transposase
Putative IS110 family transposase {ECO:0000313|EMBL:AGI71558.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octad
BD02T64_scaffold_326_2
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(424..990)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F10 RepID=UPI0002FB3C95
Uncharacterized protein {ECO:0000313|EMBL:GAF07347.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
bacteriocin-protection protein
BD02T64_scaffold_326_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1250..1681
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HFH7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDP53130.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
BD02T64_scaffold_326_4
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1741..2679
DNA (939bp) protein (313aa)
UPI0003D6AAA6 related cluster n=1 Tax=unknown RepID=UPI0003D6AAA6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD01958.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methyloh
BD02T64_scaffold_326_5
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2688..3125
DNA (438bp) protein (146aa)
UPI0003D1A286 related cluster n=1 Tax=unknown RepID=UPI0003D1A286
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDB03224.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas s
BD02T64_scaffold_326_6
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3348..5480
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Citreicella sp. 357 RepID=I1B2P0_9RHOB
Potassium-transporting ATPase subunit G {ECO:0000313|EMBL:KDB03222.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source=
Tape measure domain protein
BD02T64_scaffold_326_7
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5481..6107
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2H6V4_9RHOB rbh
glycoside hydrolase
Tax=BJP_08E140C01_Roseovarius_63_250
BD02T64_scaffold_326_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6104..6988
DNA (885bp) protein (295aa)
Putative phage cell wall peptidase, NlpC/P60 family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3S4_POLGS rbh
phage cell wall peptidase, NlpC/P60 family
Putative phage cell wall peptidase, NlpC/P60 family {ECO:0000313|EMBL:ADZ72210.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strai
BD02T64_scaffold_326_9
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6985..7443
DNA (459bp) protein (153aa)
Putative phage cell wall peptidase, NlpC/P60 family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC48_9RHOB
Peptidase {ECO:0000313|EMBL:KDB05001.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
peptidase
BD02T64_scaffold_326_10
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7447..11415
DNA (3969bp) protein (1323aa)
Putative phage tail protein/GTA TIM-barrel-like domain protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9R209_9RHOB rbh
Gene transfer agent (GTA) {ECO:0000313|EMBL:KGJ23460.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5
hypothetical protein
BD02T64_scaffold_326_11
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11412..12692
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EN2_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KEO53540.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein
BD02T64_scaffold_326_12

Not on your lists

12719..13000
DNA (282bp) protein (94aa)
UPI0003D6C4C3 related cluster n=1 Tax=unknown RepID=UPI0003D6C4C3
Uncharacterized protein {ECO:0000313|EMBL:KKM63737.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protein
BD02T64_scaffold_326_13
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13064..13756
DNA (693bp) protein (231aa)
Peptidase M15A n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LJR3_9PROT
Peptidase M15A {ECO:0000313|EMBL:EKF09260.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundi
peptidase M15A
BD02T64_scaffold_326_14
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13756..14010
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KU98_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF09259.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
hypothetical protein
BD02T64_scaffold_326_15
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14502..14738)
DNA (237bp) protein (79aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EET48331.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EET48331.1};; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
sdaB; L-serine dehydratase SdaB (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D8V5_9RHOB
BD02T64_scaffold_326_16
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14714..15421)
DNA (708bp) protein (236aa)
Transposase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DD42_9RHOB
transposase
Transposase {ECO:0000313|EMBL:AII87863.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA2
BD02T64_scaffold_326_17
unknown

Not on your lists

15435..15629
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_326_18
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16335..17327)
DNA (993bp) protein (331aa)
gap-2; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
UPI0003D1B248 related cluster n=1 Tax=unknown RepID=UPI0003D1B248 rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:KEJ88325.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source
BD02T64_scaffold_326_19
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17331..17717)
DNA (387bp) protein (129aa)
Putative ornithine cyclodeaminase, mu-crystallin n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V4F5_9RHOB
Ornithine cyclodeaminase {ECO:0000313|EMBL:KDB02118.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas
ornithine cyclodeaminase
BD02T64_scaffold_326_20
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17735..18898)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Octadecabacter arcticus 238 RepID=M9RF04_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI70787.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter
BD02T64_scaffold_326_21
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19280..19642)
DNA (363bp) protein (121aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QC42_PSYCK
Serine dehydratase {ECO:0000313|EMBL:KEJ94696.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudo
serine/threonine dehydratase
BD02T64_scaffold_326_22
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19639..20892)
DNA (1254bp) protein (418aa)
D-amino acid dehydrogenase small subunit {ECO:0000313|EMBL:EEE35815.1}; EC=1.4.99.1 {ECO:0000313|EMBL:EEE35815.1};; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales
D-amino acid dehydrogenase small subunit n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NVW3_9RHOB rbh
D-amino acid dehydrogenase small subunit
BD02T64_scaffold_326_23
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21078..22163)
DNA (1086bp) protein (362aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha prote
putrescine/spermidine ABC transporter ATP-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7757E
spermidine/putrescine ABC transporter ATPase
BD02T64_scaffold_326_24
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22160..23005)
DNA (846bp) protein (282aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Caulobacter sp. AP07 RepID=J2H8M1_9CAUL
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:GAM97070.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
BD02T64_scaffold_326_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23019..23927)
DNA (909bp) protein (303aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTD6_PARL1
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS63169.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parv
BD02T64_scaffold_326_26
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23953..25026)
DNA (1074bp) protein (358aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3F603
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source
family 1 extracellular solute-binding protein
BD02T64_scaffold_326_27
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25361..25618
DNA (258bp) protein (86aa)
5-deoxy-glucuronate isomerase (EC:5.3.1.-)
Uncharacterized protein n=1 Tax=Brucella suis 63/252 RepID=N7QBN3_BRUSS
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:KJE35897.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalasso
BD02T64_scaffold_326_28
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25780..26703)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDZ1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ43967.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
GntR family transcriptional regulator
BD02T64_scaffold_326_29
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26743..28968)
DNA (2226bp) protein (742aa)
Large subunit of N,N-dimethylformamidase n=1 Tax=Roseobacter sp. MED193 RepID=A3XDY2_9RHOB rbh
Large subunit of N,N-dimethylformamidase {ECO:0000313|EMBL:EAQ43968.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="R
large subunit of N,N-dimethylformamidase
BD02T64_scaffold_326_30
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28983..29309)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDY3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ43969.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
hypothetical protein
Displaying items 1-30 of 70 in total

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