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BD02T64_scaffold_724

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_724_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

BD02T64_scaffold_724_2
unknown

Not on your lists

comp(22..423)
DNA (402bp) protein (134aa)

This feature has no annotations

BD02T64_scaffold_724_3
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

650..1057
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LPI2_DINSH
Uncharacterized protein {ECO:0000313|EMBL:KIC48453.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
hypothetical protein
BD02T64_scaffold_724_4
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1057..1827
DNA (771bp) protein (257aa)
fhuC; cobalamin/Fe3+-siderophores ABC transporter protein (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport system protein {ECO:0000313|EMBL:ABV92306.1}; EC=3.6.3.34 {ECO:0000313|EMBL:ABV92306.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobact
ABC-type cobalamin/Fe3+-siderophores transport system protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LPI3_DINSH rbh
BD02T64_scaffold_724_5
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1846..2793
DNA (948bp) protein (316aa)
Periplasmic binding protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R3M8_9RHOB rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC48454.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" so
iron ABC transporter substrate-binding protein
BD02T64_scaffold_724_6
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2894..3895
DNA (1002bp) protein (334aa)
Putative hemin ABC transport protein, permease component n=1 Tax=Roseobacter sp. CCS2 RepID=A4EER3_9RHOB
Putative hemin ABC transport protein, permease component {ECO:0000313|EMBL:EBA13385.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobac
ABC transporter permease protein
BD02T64_scaffold_724_7
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4093..5022
DNA (930bp) protein (310aa)
Putative iron-binding periplasmic abc transporter protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4ENE2_9RHOB
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEJ90525.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;"
metal ABC transporter substrate-binding lipoprotein
BD02T64_scaffold_724_8
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5032..5907
DNA (876bp) protein (292aa)
ABC Mn+2/Fe+2 transporter, ATPase subunit SitB n=1 Tax=Roseobacter sp. CCS2 RepID=A4ENE1_9RHOB
ABC Mn+2/Fe+2 transporter, ATPase subunit SitB {ECO:0000313|EMBL:EBA10678.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" sou
manganese transporter
BD02T64_scaffold_724_9
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5904..6764
DNA (861bp) protein (287aa)
Chelated iron transport system membrane protein YfeC n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D5T5_9RHOB rbh
Chelated iron transport system membrane protein YfeC {ECO:0000313|EMBL:EET49301.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium
iron-siderophore ABC transporter ATP-binding protein
BD02T64_scaffold_724_10
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6761..7603
DNA (843bp) protein (281aa)
Putative iron transport system membrane abc transporter protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4END9_9RHOB
Membrane protein {ECO:0000313|EMBL:KEJ90528.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghico
Mn+2/Fe+2 ABC transporter inner membrane protein SitD
BD02T64_scaffold_724_11
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7657..7830)
DNA (174bp) protein (58aa)
Putative IS110 family transposase n=2 Tax=Octadecabacter arcticus 238 RepID=B5K129_9RHOB
Transposase {ECO:0000313|EMBL:AJR26416.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
putative IS110 family transposase
BD02T64_scaffold_724_12
unknown

Not on your lists

comp(7802..7909)
DNA (108bp) protein (36aa)

This feature has no annotations

BD02T64_scaffold_724_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8059..8613)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMB1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDP65715.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
BD02T64_scaffold_724_14
unknown

Not on your lists

8980..9255
DNA (276bp) protein (92aa)

This feature has no annotations

BD02T64_scaffold_724_15
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9363..10886)
DNA (1524bp) protein (508aa)
Chloroacetaldehyde dehydrogenase n=1 Tax=Roseobacter sp. MED193 RepID=A3XDT6_9RHOB rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEJ94329.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter ps
aldehyde dehydrogenase
BD02T64_scaffold_724_16

Not on your lists

comp(11017..11976)
DNA (960bp) protein (320aa)
Transcriptional regulatory protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDT7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM30256.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GAF sensor protein
BD02T64_scaffold_724_17
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12328..13224)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K4B0_9RHOB
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EBA07809.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" sourc
LysR family transcriptional regulator
BD02T64_scaffold_724_18
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13358..13780
DNA (423bp) protein (141aa)
DoxX family protein n=4 Tax=Rhodobacter capsulatus RepID=D5APZ3_RHOCB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO50754.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
DoxX family protein
BD02T64_scaffold_724_19
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13831..14655
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XE42_9RHOB rbh
Dioxygenase {ECO:0000313|EMBL:KGM47002.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
extradiol ring-cleavage dioxygenase III subunit B
BD02T64_scaffold_724_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15852..16568
DNA (717bp) protein (239aa)
exsB; Queuosine biosynthesis protein queC (EC:3.5.-.-)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFM5_RHIFH rbh
BD02T64_scaffold_724_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16561..16917
DNA (357bp) protein (119aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXP7_9RHIZ rbh
queD; queuosine biosynthesis protein QueD
BD02T64_scaffold_724_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16914..17651
DNA (738bp) protein (246aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Rhizobium giardinii RepID=UPI00036CEC46 rbh
exsD; organic-radical-activating protein
BD02T64_scaffold_724_23
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..18140
DNA (468bp) protein (156aa)
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7EJH1_PHAIB
BD02T64_scaffold_724_24
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18753..19406
DNA (654bp) protein (218aa)
peroxiredoxin (EC:1.11.1.15)
Antioxidant, AhpC/Tsa family, putative n=1 Tax=Roseobacter sp. CCS2 RepID=A4EM07_9RHOB
Antioxidant, AhpC/Tsa family, putative {ECO:0000313|EMBL:EBA11237.1}; TaxID=391593 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ros
BD02T64_scaffold_724_25
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19642..20148)
DNA (507bp) protein (169aa)
Putative GFA family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=M9REN4_9RHOB rbh
putative GFA family protein
Putative GFA family protein {ECO:0000313|EMBL:AGI68270.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabac
BD02T64_scaffold_724_26
Hyphomonas oceanitis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20251..20619)
DNA (369bp) protein (123aa)
Globin n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R598_9RHOB
Globin {ECO:0000313|EMBL:KDA02659.1}; TaxID=1280953 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas oceanitis SCH89.;"
globin
BD02T64_scaffold_724_27
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20793..21308)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RCX7_9RHOB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI68271.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter
BD02T64_scaffold_724_28
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21505..22386
DNA (882bp) protein (294aa)
LysR family transcriptional regulator n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R903_9RHOB rbh
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AGI68273.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="O
BD02T64_scaffold_724_29
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22482..24044)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SMS4_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP75764.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
hypothetical protein
BD02T64_scaffold_724_30
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24437..24907
DNA (471bp) protein (157aa)
UPI0003D6C203 related cluster n=1 Tax=unknown RepID=UPI0003D6C203
Uncharacterized protein {ECO:0000313|EMBL:KIC14771.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
prolyl-tRNA synthetase
Displaying items 1-30 of 50 in total

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