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BD02T64_scaffold_846

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_846_1
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
IS3 family element, transposase orfB n=3 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JQJ0_9RHOB
IS3 family element, transposase orfB {ECO:0000313|EMBL:EBA04030.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae b
integrase catalytic region
BD02T64_scaffold_846_2
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(356..631)
DNA (276bp) protein (92aa)
UPI0003D1ACA4 related cluster n=1 Tax=unknown RepID=UPI0003D1ACA4
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53134.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
IS3-family transposase
BD02T64_scaffold_846_3
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1011..2078
DNA (1068bp) protein (356aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A {ECO:0000313|EMBL:AEH85261.1}; EC=2.5.1.47 {ECO:0000313|EMBL:AEH85261.1};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mes
Cysteine synthase A n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7U2_MESOW rbh
BD02T64_scaffold_846_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2597..3325
DNA (729bp) protein (243aa)
ChaC-like protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VI43_9RHOB rbh
ChaC-like protein {ECO:0000313|EMBL:EAQ12042.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkali
ChaC-like protein
BD02T64_scaffold_846_5
unknown

Not on your lists

3288..3410
DNA (123bp) protein (41aa)

This feature has no annotations

BD02T64_scaffold_846_6
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3931..5244)
DNA (1314bp) protein (438aa)
CBS domain protein n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NT15_9RHOB
Membrane protein {ECO:0000313|EMBL:KAJ56888.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum
CBS domain protein
BD02T64_scaffold_846_7
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5325..6125
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T1A4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP79350.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp
putative phosphatase
BD02T64_scaffold_846_8
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6122..7024)
DNA (903bp) protein (301aa)
Tyrosine recombinase XerC n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q164J2_ROSDO
xerD; tyrosine recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
BD02T64_scaffold_846_9
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7027..8580)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKF5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW60607.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. C
hypothetical protein
BD02T64_scaffold_846_10
unknown

Not on your lists

comp(8584..8718)
DNA (135bp) protein (45aa)

This feature has no annotations

BD02T64_scaffold_846_11
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8872..9465
DNA (594bp) protein (198aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1219045 species="Bacteria; Proteobacteria; Alphap
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00037DD66B
BD02T64_scaffold_846_12
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9455..10570
DNA (1116bp) protein (372aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1461693 species="Bacteri
aroB; 3-dehydroquinate synthase AroB (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558D7E
BD02T64_scaffold_846_13
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..11583)
DNA (945bp) protein (315aa)
Radical SAM domain protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q165T4_ROSDO
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABG32259.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter den
BD02T64_scaffold_846_14
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11879..13540
DNA (1662bp) protein (554aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI0003798B34
Uncharacterized protein {ECO:0000313|EMBL:KEO51738.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
BD02T64_scaffold_846_15
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13730..14617
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E1T9_9RHOB
Metallophosphoesterase {ECO:0000313|EMBL:KAJ02692.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter medi
Ser/Thr protein phosphatase family protein
BD02T64_scaffold_846_16
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14632..15495
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28LW1_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGB82375.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
BD02T64_scaffold_846_17
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15506..17284
DNA (1779bp) protein (593aa)
TrkA domain protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FQF9_9RHOB
TrkA domain protein {ECO:0000313|EMBL:EDM71750.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3
transporter
BD02T64_scaffold_846_18
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17348..18088
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein RBY4I_3754 n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B8B0_9RHOB
Probable transcriptional regulatory protein JT55_08295 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodo
hypothetical protein DUF28
BD02T64_scaffold_846_19
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..19286
DNA (1131bp) protein (377aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=138
Carboxylate-amine ligase Dshi_1749 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=CAAL_DINSH
carboxylate-amine ligase bll3764
BD02T64_scaffold_846_20
Roseobacter sp. CCS2, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19332..19838)
DNA (507bp) protein (169aa)
Single-stranded DNA-binding protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EMD4_9RHOB
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=391593 species="Bacteria; Proteobacteria; Alph
single-stranded DNA-binding protein
BD02T64_scaffold_846_21
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19990..20571
DNA (582bp) protein (194aa)
Transglycosylase SLT domain protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYE0_KETVY
Lytic transglycosylase {ECO:0000313|EMBL:KGL02954.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter
lytic transglycosylase
BD02T64_scaffold_846_22
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20568..20930)
DNA (363bp) protein (121aa)
Rhodanese-like domain protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLA7_9RHOB rbh
Rhodanese-like domain protein {ECO:0000313|EMBL:EAQ10912.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimib
rhodanese-like domain protein
BD02T64_scaffold_846_23
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21146..23974
DNA (2829bp) protein (943aa)
UvrABC system protein A n=1 Tax=Roseovarius sp. 217 RepID=A3VW40_9RHOB
uvrA; excinuclease ABC subunit A
Tax=BJP_08E140C01_Roseovarius_63_250
BD02T64_scaffold_846_24
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24120..25025
DNA (906bp) protein (302aa)
Lysophospholipase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY18_NITHN
phospholipase, patatin family protein
Phospholipase, patatin family protein {ECO:0000313|EMBL:AJE46334.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Ce
BD02T64_scaffold_846_25
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25208..25669
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28TP4_JANSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM02915.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium
BD02T64_scaffold_846_26
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25745..26077)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VN81_POLNA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM37109.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Po
BD02T64_scaffold_846_27
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26274..28181)
DNA (1908bp) protein (636aa)
bifunctional enzyme (EC:1.1.1.31 3.1.2.4)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=391595 species="Bacteria; Proteob
Bifunctional enzyme n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZF05_ROSLO rbh
BD02T64_scaffold_846_28
Leisingera methylohalidivorans, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28174..29325)
DNA (1152bp) protein (384aa)
UPI0003D6AA4E related cluster n=1 Tax=unknown RepID=UPI0003D6AA4E
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHD00819.1}; TaxID=999552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera methyloha
BD02T64_scaffold_846_29
unknown

Not on your lists

comp(29330..29566)
DNA (237bp) protein (79aa)

This feature has no annotations

BD02T64_scaffold_846_30
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29699..31195)
DNA (1497bp) protein (499aa)
mmsA; methylmalonate-semialdehyde dehydrogenase MmsA (EC:1.2.1.27 1.2.1.18)
Methylmalonate-semialdehyde dehydrogenase MmsA {ECO:0000313|EMBL:AII87005.1}; EC=1.2.1.18 {ECO:0000313|EMBL:AII87005.1};; EC=1.2.1.27 {ECO:0000313|EMBL:AII87005.1};; TaxID=666509 species="Bacteria; Pr
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Loktanella vestfoldensis RepID=UPI000368190A
Displaying items 1-30 of 42 in total

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