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BD02T64_scaffold_104

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Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_104_1

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1..873
DNA (873bp) protein (291aa)
Integral membrane protein, putative n=1 Tax=Roseobacter sp. GAI101 RepID=B7RHJ5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN58590.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative drug/metabolite transporter superfamily permease
BD02T64_scaffold_104_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(926..1798)
DNA (873bp) protein (291aa)
hbd; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ACJ01446.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ACJ01446.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYS2_RHOCS
BD02T64_scaffold_104_3
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1866..2795)
DNA (930bp) protein (310aa)
Electron transfer flavoprotein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W292_MAGSA
electron transfer flavoprotein
Electron transfer flavoprotein {ECO:0000313|EMBL:BAE52033.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magn
BD02T64_scaffold_104_4
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2795..3544)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMS1_9RHIZ
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:GAK44457.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
electron transfer flavoprotein subunit beta
BD02T64_scaffold_104_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3747..4310)
DNA (564bp) protein (188aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P777_AZOS1 rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EWY37041.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.
ATP:cob(I)alamin adenosyltransferase
BD02T64_scaffold_104_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4316..4561)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RA53_PHEZH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79557.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
BD02T64_scaffold_104_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4584..5750
DNA (1167bp) protein (389aa)
FAD-dependent oxidoreductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B68F2F rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKE78384.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceaniba
FAD-dependent oxidoreductase
BD02T64_scaffold_104_8
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5775..5969
DNA (195bp) protein (65aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source
4-oxalocrotonate tautomerase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VTA6_9CYAN
4-oxalocrotonate tautomerase
BD02T64_scaffold_104_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5973..6794
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003808B16
ribonuclease BN Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
ribonuclease BN
BD02T64_scaffold_104_10
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6795..8078)
DNA (1284bp) protein (428aa)
FAD dependent oxidoreductase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LXF0_9PROT
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AJD53009.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalasso
BD02T64_scaffold_104_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8195..9874)
DNA (1680bp) protein (560aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTJ9_PARL1
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABS63232.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculu
BD02T64_scaffold_104_12
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9936..11240)
DNA (1305bp) protein (435aa)
crotonyl-CoA reductase (EC:1.6.5.5)
crotonyl-CoA reductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4ADC7
Crotonyl-CoA reductase {ECO:0000313|EMBL:GAK34015.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
BD02T64_scaffold_104_13
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11488..13500
DNA (2013bp) protein (671aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ABC23857.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ABC23857.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
Methylmalonyl-CoA mutase, large subunit n=2 Tax=Rhodospirillum rubrum RepID=G2TA33_RHORU
BD02T64_scaffold_104_14
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13515..13910)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CYU1_9RHIZ
Putative relative of glutathione S-transferase, MAPEG superfamily {ECO:0000313|EMBL:EDQ34638.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; H
hypothetical protein
BD02T64_scaffold_104_15
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13933..14781)
DNA (849bp) protein (283aa)
glutamyl- and glutaminyl-tRNA synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
putative Glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-tRNA synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUJ6_9PROT rbh
BD02T64_scaffold_104_16
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14909..16189
DNA (1281bp) protein (427aa)
Carboxy-terminal processing peptidase S41A {ECO:0000313|EMBL:CBS90725.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CBS90725.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospiril
Carboxy-terminal processing peptidase S41A n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZG45_AZOL4
ctpA2; Carboxy-terminal processing peptidase S41A
BD02T64_scaffold_104_17
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16194..16826
DNA (633bp) protein (211aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HNY2_9PROT rbh
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:EKV32023.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="C
DNA glycosylase
BD02T64_scaffold_104_18
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16981..17532
DNA (552bp) protein (184aa)
Putative endonuclease protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G7C7_9RHIZ
Putative endonuclease protein {ECO:0000313|EMBL:EAU42437.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pel
HNH endonuclease
BD02T64_scaffold_104_19
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17628..18356
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003762644
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK53775.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
BD02T64_scaffold_104_20
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18373..18951)
DNA (579bp) protein (193aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rul
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000375F489 rbh
putative Ubiquinone biosynthesis protein COQ7 homolog
BD02T64_scaffold_104_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18970..19461)
DNA (492bp) protein (164aa)
Disulfide bond formation protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JYA8_9PROT
Disulfide bond formation protein {ECO:0000313|EMBL:EWY39618.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skerma
putative Disulfide bond formation protein DsbB
BD02T64_scaffold_104_22

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comp(19485..20066)
DNA (582bp) protein (194aa)
DedA family protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HUX2_9PROT
Marine sediment metagenome DNA, contig: S01H1_S21293 {ECO:0000313|EMBL:GAG25601.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DedA family protein
BD02T64_scaffold_104_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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20318..21028
DNA (711bp) protein (237aa)
Transcriptional regulator, OmpR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X867_VARPD
transcriptional regulatory protein ompR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
transcriptional regulator, OmpR family
BD02T64_scaffold_104_24
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21460..22257)
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Osedax symbiont Rs2 RepID=S6GNM2_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EPJ54026.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" sourc
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_104_25
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22258..23103)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GTG2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ54025.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
putative LuxR family transcriptional regulator
BD02T64_scaffold_104_26
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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23256..24431
DNA (1176bp) protein (392aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; un
pota9; Spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Osedax symbiont Rs2 RepID=S6HQ58_9GAMM rbh
BD02T64_scaffold_104_27
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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24509..25675
DNA (1167bp) protein (389aa)
Bacterial extracellular solute-binding protein, putative n=1 Tax=Osedax symbiont Rs2 RepID=S6I0V9_9GAMM rbh
Bacterial extracellular solute-binding protein, putative {ECO:0000313|EMBL:EPJ54023.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospir
spermidine/putrescine ABC transporter periplasmatic substrate-binding protein
BD02T64_scaffold_104_28
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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25708..26568
DNA (861bp) protein (287aa)
ABC transporter, permease protein, putative n=1 Tax=Osedax symbiont Rs2 RepID=S6GPW3_9GAMM rbh
ABC transporter, permease protein, putative {ECO:0000313|EMBL:EPJ54022.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" s
spermidine/putrescine ABC transporter permease protein
BD02T64_scaffold_104_29
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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26585..27433
DNA (849bp) protein (283aa)
Polyamine ABC transporter permease PotC n=1 Tax=Osedax symbiont Rs2 RepID=S6GNM0_9GAMM rbh
Polyamine ABC transporter permease PotC {ECO:0000313|EMBL:EPJ54021.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" sourc
spermidine/putrescine ABC transporter permease protein
BD02T64_scaffold_104_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27438..28199
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SHM8_9RHIZ rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX20426.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
short chain dehydrogenase/reductase family oxidoreductase
Displaying items 1-30 of 223 in total

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