ggKbase home page

BD02T64_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 259 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_165_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2336)
DNA (2334bp) protein (778aa)
ATP-dependent helicase MgpS n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUI0_RHOCS
mgpS; ATP-dependent helicase MgpS
ATP-dependent helicase MgpS {ECO:0000313|EMBL:ACI99805.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospir
BD02T64_scaffold_165_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2609..4756
DNA (2148bp) protein (716aa)
bhbA; Methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:CDL00470.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CDL00470.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
Methylmalonyl-CoA mutase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXI5_9PROT rbh
BD02T64_scaffold_165_3
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4819..5850
DNA (1032bp) protein (344aa)
Acetylpolyamine aminohydrolase (Histone deacetylase family) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S8T6_9BRAD rbh
Acetylpolyamine aminohydrolase (Histone deacetylase family) {ECO:0000313|EMBL:CCD90613.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhi
aphA; acetylpolyamine aminohydrolase
BD02T64_scaffold_165_4
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(5873..6277)
DNA (405bp) protein (135aa)
Cytidine deaminase {ECO:0000313|EMBL:ELS03190.1}; EC=3.5.4.5 {ECO:0000313|EMBL:ELS03190.1};; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 730
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M6W4_9CYAN rbh
BD02T64_scaffold_165_5
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

Not on your lists

comp(6289..7296)
DNA (1008bp) protein (336aa)
Uncharacterized protein (Fragment) n=1 Tax=Xenopus tropicalis RepID=F7E0W3_XENTR
Trans-L-3-hydroxyproline dehydratase {ECO:0000313|Ensembl:ENSXETP00000037091}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrach
proline racemase
BD02T64_scaffold_165_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7398..8408
DNA (1011bp) protein (337aa)
LAO/AO transport system ATPase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTU1_PARL1
Arginine/ornithine transport system ATPase {ECO:0000313|EMBL:GAK45436.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
arginine/ornithine transport system ATPase
BD02T64_scaffold_165_7
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8541..8828
DNA (288bp) protein (96aa)
50S ribosomal protein L28 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=RL28_DINSH
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinorose
BD02T64_scaffold_165_8
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8991..9755
DNA (765bp) protein (255aa)
Putative carboxymethylenebutenolidase (EC:3.1.1.45)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003676720 rbh
dienelactone hydrolase family protein Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
BD02T64_scaffold_165_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9766..11562)
DNA (1797bp) protein (599aa)
CobT protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK88_9PROT rbh
CobT protein {ECO:0000313|EMBL:EDP67012.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
cobalt chelatase large subunit
BD02T64_scaffold_165_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11630..12625)
DNA (996bp) protein (332aa)
cobS; Aerobic cobaltochelatase cobS subunit (cobalamin biosynthesis) (EC:6.6.1.2)
Cobaltochelatase small subunit {ECO:0000313|EMBL:CAM77471.1}; EC=6.6.1.2 {ECO:0000313|EMBL:CAM77471.1};; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospir
aerobic cobaltochelatase subunit CobS n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037265EE rbh
BD02T64_scaffold_165_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12669..13232)
DNA (564bp) protein (188aa)
DnaJ-like molecular chaperone n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQN6_AZOS1 rbh
DnaJ-like molecular chaperone
DnaJ-like molecular chaperone {ECO:0000313|EMBL:BAI70715.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiril
BD02T64_scaffold_165_12
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13410..13841)
DNA (432bp) protein (144aa)
Cro/Cl family transcriptional regulator n=1 Tax=Novispirillum itersonii RepID=UPI00037C7EAA rbh
Transcriptional regulator {ECO:0000313|EMBL:EPY01921.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospiri
XRE family transcriptional regulator
BD02T64_scaffold_165_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14050..14322
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JQT9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE76902.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
BolA family protein
BD02T64_scaffold_165_14
unknown

Not on your lists

14410..14715
DNA (306bp) protein (102aa)

This feature has no annotations

BD02T64_scaffold_165_15
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14675..15553)
DNA (879bp) protein (293aa)
Putative permease n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H0W6_9PROT
Putative permease {ECO:0000313|EMBL:EKV31925.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum sal
permease
BD02T64_scaffold_165_16
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15589..16866)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTV2_PARL1
Conserved protein {ECO:0000313|EMBL:GAK45418.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
BD02T64_scaffold_165_17
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16894..18036)
DNA (1143bp) protein (381aa)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodo
3-dehydroquinate synthase n=2 Tax=Rhodospirillum rubrum RepID=AROB_RHORT
3-dehydroquinate synthase
BD02T64_scaffold_165_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18082..18639)
DNA (558bp) protein (186aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphap
Shikimate kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTV4_PARL1
shikimate kinase
BD02T64_scaffold_165_19
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18953..20776
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GP24_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV26897.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirill
hypothetical protein
BD02T64_scaffold_165_20
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20779..21681
DNA (903bp) protein (301aa)
tyrosine recombinase XerD n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6B928 rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalass
xerD; site-specific tyrosine recombinase
BD02T64_scaffold_165_21
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21777..22763
DNA (987bp) protein (329aa)
Malyl-CoA lyase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MNG7_9PROT
Malyl-CoA lyase {ECO:0000313|EMBL:KJE36578.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.
malyl-CoA lyase
BD02T64_scaffold_165_22
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22883..23842
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI0003608A44
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
accA; Acetyl-CoA carboxylase alpha subunit
BD02T64_scaffold_165_23
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23859..24362
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZTW6_RHILW
N-acetyltransferase GCN5
Sortase-like acyltransferase {ECO:0000313|EMBL:EJB07882.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
BD02T64_scaffold_165_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24393..25235)
DNA (843bp) protein (281aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2R4_9BRAD rbh
short-chain dehydrogenase/reductase SDR Tax=GWA2_Rokubacteria_70_23_curated
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
BD02T64_scaffold_165_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25381..26598
DNA (1218bp) protein (406aa)
Diguanylate phosphodiesterase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPQ8_PARL1 rbh
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ABS61891.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="
BD02T64_scaffold_165_26
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26704..27579
DNA (876bp) protein (292aa)
Putative sugar phosphatase (HAD superfamily) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHE8_AZOBR
putative sugar phosphatase (HAD superfamily)
Putative sugar phosphatase (HAD superfamily) {ECO:0000313|EMBL:CCC99323.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" s
BD02T64_scaffold_165_27
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27636..28286)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4QFM9_9CAUL
Chemotaxis regulator CheZ {ECO:0000313|EMBL:GAK34231.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
chemotaxis phosphatase chez
BD02T64_scaffold_165_28
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28286..28672)
DNA (387bp) protein (129aa)
chemotaxis protein CheY n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003771587 rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:GAK34230.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
response regulator receiver protein
BD02T64_scaffold_165_29
unknown

Not on your lists

28732..28908
DNA (177bp) protein (59aa)

This feature has no annotations

BD02T64_scaffold_165_30
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28953..29387
DNA (435bp) protein (145aa)
phaJ; (R)-specific trans-2,3-enoyl acyl-CoA hydratase (MaoC dehydratase family) (EC:4.2.1.17)
Putative acyl dehydratase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2MAV1_9PROT
Dehydratase {ECO:0000313|EMBL:KJE35722.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
Displaying items 1-30 of 259 in total

View Taxonomy