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BD02T64_scaffold_197

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Displaying items 61-90 of 152 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_197_61
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62027..63691
DNA (1665bp) protein (555aa)
NAD synthetase {ECO:0000313|EMBL:KGM31411.1}; EC=6.3.5.1 {ECO:0000313|EMBL:KGM31411.1};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inqu
NAD synthetase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B400C6 rbh
NAD+ synthetase
BD02T64_scaffold_197_62
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63688..65019
DNA (1332bp) protein (444aa)
glutamyl-tRNA(Gln) synthetase (EC:6.1.1.24)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1384459 species="Bacteria; P
Glutamyl/glutaminyl-tRNA synthetase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWQ8_9PROT rbh
BD02T64_scaffold_197_63
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65037..66416
DNA (1380bp) protein (460aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037EE2B2
BD02T64_scaffold_197_64
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66417..66635
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037F6095
Uncharacterized protein {ECO:0000313|EMBL:KGH09879.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
BD02T64_scaffold_197_65
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66794..68401
DNA (1608bp) protein (536aa)
(R)-citramalate synthase {ECO:0000313|EMBL:CDO60766.1}; EC=2.3.1.182 {ECO:0000313|EMBL:CDO60766.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS43_PARL1
putative alpha-isopropylmalate/homocitrate synthase family transferase
BD02T64_scaffold_197_66
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68432..69181
DNA (750bp) protein (250aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWA7_PARL1
RNA methyltransferase
BD02T64_scaffold_197_67
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69178..70086
DNA (909bp) protein (303aa)
h16_A1537; S33 family peptidase (EC:3.-.-.-) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Putative peptidase, S33 family id=4930093 bin=GWA2_Methylomirabilis_73_35 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
epoxide hydrolase
BD02T64_scaffold_197_68
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


70187..70804
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NP58_9RHOB
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggre
rpsD; 30S ribosomal protein S4
BD02T64_scaffold_197_69
unknown

Not on your lists

71081..71842
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B47B7A
BD02T64_scaffold_197_70
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72146..74380
DNA (2235bp) protein (745aa)
methyl-accepting chemotaxis protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B467A2 rbh
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
methyl-accepting chemotaxis sensory transducer
BD02T64_scaffold_197_71
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74629..75363
DNA (735bp) protein (245aa)
Membrane protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QNI6_PSECO rbh
Membrane protein {ECO:0000313|EMBL:ESR01449.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloritidism
hypothetical protein
BD02T64_scaffold_197_72
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75360..76016)
DNA (657bp) protein (219aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHS4_XANP2
phosphoribosylglycinamide formyltransferase
BD02T64_scaffold_197_73
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76013..77095)
DNA (1083bp) protein (361aa)
purM; Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EWN8_9PROT
BD02T64_scaffold_197_74
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77162..78313
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3C4C4
Uncharacterized protein {ECO:0000313|EMBL:EKE72439.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum
hypothetical protein
BD02T64_scaffold_197_75
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78332..78865
DNA (534bp) protein (178aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDI5_9BRAD rbh
putative phosphatidylglycerophosphate synthase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
CDP-alcohol phosphatidyltransferase
BD02T64_scaffold_197_76
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78886..79974
DNA (1089bp) protein (363aa)
Permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2JCA1_9PROT
Permease {ECO:0000313|EMBL:EKE72437.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
permease
BD02T64_scaffold_197_77
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79971..80657
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035E4867
DNA replication protein {ECO:0000313|EMBL:KJB97670.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
BD02T64_scaffold_197_78
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80641..81420
DNA (780bp) protein (260aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DKI8_BRAJP rbh
3-oxoacyl-ACP reductase
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:BAL13817.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
BD02T64_scaffold_197_79
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81441..81872
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LXL8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJV09216.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
BD02T64_scaffold_197_80
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81986..84139
DNA (2154bp) protein (718aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7767C
polyphosphate kinase
BD02T64_scaffold_197_81
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84163..85686
DNA (1524bp) protein (508aa)
Ppx n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IN49_RHOCS
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AIB14122.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense
BD02T64_scaffold_197_82
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85673..86824)
DNA (1152bp) protein (384aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899, ECO:0000313|EMBL:KJB97695.1}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1385368 species="
Ribonuclease D n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y191_9PROT rbh
rnd; ribonuclease D
BD02T64_scaffold_197_83
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


87020..88804
DNA (1785bp) protein (595aa)
aspS; aspartyl-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L1X5_9PROT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KJE35076.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospir
BD02T64_scaffold_197_84
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88912..90594
DNA (1683bp) protein (561aa)
Signal transduction protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TP58_TISMK rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV09741.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
yhjK; signal transduction protein
BD02T64_scaffold_197_85
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90640..92307)
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase n=1 Tax=Rhizobium meliloti RepID=UPI000376D256
hutU; putative urocanate hydratase (urocanase) protein
BD02T64_scaffold_197_86
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92328..93869)
DNA (1542bp) protein (514aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
histidine ammonia-lyase (EC:4.3.1.3)
histidine ammonia-lyase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B70DE5 rbh
BD02T64_scaffold_197_87
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93870..95084)
DNA (1215bp) protein (405aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
Imidazolonepropionase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NY52_9RHOB
hutI; Imidazolonepropionase
BD02T64_scaffold_197_88
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95254..95958
DNA (705bp) protein (235aa)
Histidine utilization repressor n=1 Tax=Roseobacter sp. MED193 RepID=A3X9S7_9RHOB
Histidine utilization repressor {ECO:0000313|EMBL:EAQ45426.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacte
hutC; histidine utilization repressor
BD02T64_scaffold_197_89
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95980..99651)
DNA (3672bp) protein (1224aa)
Vitamin B12-dependent ribonucleotide reductase {ECO:0000313|EMBL:CDK98048.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CDK98048.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospi
nrd; Vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F0M0_9PROT rbh
BD02T64_scaffold_197_90
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100138..100503
DNA (366bp) protein (122aa)
NADH dehydrogenase {ECO:0000313|EMBL:EKE68977.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EKE68977.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae;
NADH dehydrogenase (EC:1.6.99.3)
NADH dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J291_9PROT rbh
Displaying items 61-90 of 152 in total

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