ggKbase home page

BD02T64_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 152 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_197_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

443..1348
DNA (906bp) protein (302aa)
Response regulator/GGDEF domain protein id=2109838 bin=GWB2_Desulfobacterales_56_26 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
putative response regulator receiver modulated diguanylate cyclase Tax=GWB2_Desulfobacterales_56_26_curated
response regulator receiver modulated diguanylate cyclase
BD02T64_scaffold_197_2
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1345..1974)
DNA (630bp) protein (210aa)
Ribosomal large subunit pseudouridine synthase A n=1 Tax=Aeromonas media WS RepID=K2IB90_AERME rbh
ribosomal large subunit pseudouridine synthase A
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:AHX62492.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source
BD02T64_scaffold_197_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2090..3235)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIE8_TISMK rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AFK52536.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
BD02T64_scaffold_197_4
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3457..4755
DNA (1299bp) protein (433aa)
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:CDL01115.1}; EC=2.7.7.65 {ECO:0000313|EMBL:CDL01115.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteri
Response regulator/GGDEF domain protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYT9_9PROT
response regulator receiver protein
BD02T64_scaffold_197_5
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4797..5135)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z3S2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME69020.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospi
hypothetical protein
BD02T64_scaffold_197_6
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5149..5514)
DNA (366bp) protein (122aa)
FeS assembly SUF system protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037A3778
Uncharacterized protein {ECO:0000313|EMBL:ESQ15110.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
hypothetical protein DUF59
BD02T64_scaffold_197_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5524..5979)
DNA (456bp) protein (152aa)
NifU family SUF system FeS assembly protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5D7_9PROT
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:EKE78114.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" s
hypothetical protein
BD02T64_scaffold_197_8
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5979..7211)
DNA (1233bp) protein (411aa)
csdB; selenocysteine lyase (EC:4.4.1.16)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=243233 species="Bacteria; Proteob
cysteine desulfurase n=1 Tax=Methylococcus capsulatus RepID=UPI000317D312
BD02T64_scaffold_197_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7221..8495)
DNA (1275bp) protein (425aa)
ABC transporter involved in Fe-S cluster assembly protein SufD n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AQC0_AZOBR
FeS assembly protein SufD {ECO:0000313|EMBL:EWY37898.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella s
Fe-S cluster assembly protein SufD
BD02T64_scaffold_197_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8540..9283)
DNA (744bp) protein (248aa)
Fe-S cluster assembly ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P4Z2_AZOS1
sufC; Fe-S cluster assembly ATP-binding protein
Fe-S cluster assembly ATP-binding protein {ECO:0000313|EMBL:BAI75721.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" sourc
BD02T64_scaffold_197_11
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9338..10807)
DNA (1470bp) protein (490aa)
Cysteine desulfurase activator complex subunit SufB n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZY8_9PROT rbh
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EGY01166.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospiri
cysteine desulfurase
BD02T64_scaffold_197_12
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10811..11278)
DNA (468bp) protein (156aa)
Putative FeS assembly SUF system transcriptional regulator, Rtf2 family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZF71_AZOL4
putative FeS assembly SUF system transcriptional regulator, Rtf2 family
Putative FeS assembly SUF system transcriptional regulator, Rtf2 family {ECO:0000313|EMBL:CBS90090.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospiri
BD02T64_scaffold_197_13
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11590..12687
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000347CCFF
Uncharacterized protein {ECO:0000313|EMBL:CEG22109.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
BD02T64_scaffold_197_14
unknown

Not on your lists

12684..13484
DNA (801bp) protein (267aa)

This feature has no annotations

BD02T64_scaffold_197_15
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13481..14431
DNA (951bp) protein (317aa)
ADP-heptose--lipooligosaccharide heptosyltransferase II (EC:2.4.1.-)
ADP-heptose--lipooligosaccharide heptosyltransferase II {ECO:0000313|EMBL:AGH97517.1}; EC=2.4.1.- {ECO:0000313|EMBL:AGH97517.1};; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; M
ADP-heptose--lipooligosaccharide heptosyltransferase II n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VDT6_9PROT
BD02T64_scaffold_197_16
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14503..15282
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02057.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Bll4979 protein id=3847112 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
hypothetical protein
BD02T64_scaffold_197_17
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15382..16284)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0003029484
conserved protein of unknown function
UPF0176 protein BN1209_0826 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacter
BD02T64_scaffold_197_18
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16479..18287
DNA (1809bp) protein (603aa)
ABC transporter n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LWW8_9PROT rbh
Elongation factor 3 {ECO:0000313|EMBL:KJE35976.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp.
ABC transporter
BD02T64_scaffold_197_19
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18306..19334)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Corynebacterium lubricantis RepID=UPI00035D7710 rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KAJ04792.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter medite
alpha/beta hydrolase
BD02T64_scaffold_197_20
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19369..20109)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B6A06 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KJB96351.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="S
rutR; Transcriptional regulator, TetR family
BD02T64_scaffold_197_21
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20256..21095
DNA (840bp) protein (280aa)
PEP phosphonomutase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A659_STAND
PEP phosphonomutase
PEP phosphonomutase {ECO:0000313|EMBL:ADH88209.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATC
BD02T64_scaffold_197_22
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21353..22708
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000382CC3F
Dihydropyrimidine dehydrogenase subunit A {ECO:0000313|EMBL:KJB96352.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" sourc
putative oxidoreductase
BD02T64_scaffold_197_23
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22726..24000
DNA (1275bp) protein (425aa)
Dihydroorotate dehydrogenase family protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TW49_TISMK rbh
yeiA; dihydroorotate dehydrogenase family protein
Dihydroorotate dehydrogenase family protein {ECO:0000313|EMBL:AFK56987.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" sourc
BD02T64_scaffold_197_24
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24059..25249
DNA (1191bp) protein (397aa)
allantoate amidohydrolase n=1 Tax=Marinobacterium stanieri RepID=UPI0002558B7E
Allantoate amidohydrolase {ECO:0000313|EMBL:CEA06615.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
allantoate amidohydrolase
BD02T64_scaffold_197_25
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25391..26182
DNA (792bp) protein (264aa)
ABC transporter, ATP-binding protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QRX2_9RHOB
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEE47176.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenz
nitrate ABC transporter ATPase
BD02T64_scaffold_197_26
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26175..27089
DNA (915bp) protein (305aa)
ABC transporter permease n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KRC8_9PROT
ABC transporter permease {ECO:0000313|EMBL:KJE34524.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospir
ABC transporter permease
BD02T64_scaffold_197_27
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27086..28225
DNA (1140bp) protein (380aa)
hypothetical protein, partial n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00036660DA rbh
Nitrate ABC transporter {ECO:0000313|EMBL:KEO58105.1}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
ABC transporter permease
BD02T64_scaffold_197_28
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28311..29309
DNA (999bp) protein (333aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI0003779271
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB96358.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein
BD02T64_scaffold_197_29
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29452..30174
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GPE8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ53476.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_197_30
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30328..31005
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6H7B5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ43683.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
Displaying items 1-30 of 152 in total

View Taxonomy