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BD02T64_scaffold_340

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Displaying items 1-30 of 109 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_340_1
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2766
DNA (2766bp) protein (922aa)
Putative RTX toxin n=1 Tax=Roseovarius sp. 217 RepID=A3W655_9RHOB
Putative RTX toxin {ECO:0000313|EMBL:EAQ24050.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
outer membrane adhesin-like protein
BD02T64_scaffold_340_2
uncultured Planctomycetales bacterium HF0770_03I01, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2937..3992)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002EF711A rbh
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:ADI23040.1}; TaxID=723609 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultu
hypothetical protein
BD02T64_scaffold_340_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4530..5003)
DNA (474bp) protein (158aa)
HTH-type transcriptional regulator mlrA MerR-like regulator A n=2 Tax=Rhizobium fredii RepID=G9A3U9_RHIFH
MerR family transcriptional regulator {ECO:0000313|EMBL:KKB81068.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sol
MerR family transcriptional regulator
BD02T64_scaffold_340_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5024..5323)
DNA (300bp) protein (100aa)
transcriptional regulator n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036BF6EF
ihfA; integration host factor alpha-subunit (IHF-alpha)
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=862719 species="Bacteria; Proteobacter
BD02T64_scaffold_340_5
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5520..6491)
DNA (972bp) protein (324aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0K9_9PROT rbh
BD02T64_scaffold_340_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6531..7628)
DNA (1098bp) protein (366aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]
Phosphate acyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=PLSX_RHOCS
plsX; putative glycerol-3-phosphate acyltransferase PlsX
BD02T64_scaffold_340_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7677..7862)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMR1_AZOBR rbh
rpmF; 50S ribosomal subunit protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospiri
BD02T64_scaffold_340_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7934..8500)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NTD0_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71659.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp
BD02T64_scaffold_340_9
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8689..9276)
DNA (588bp) protein (196aa)
CBP3 protein, mitochondrial n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4S1_MAGSA rbh
CBP3 protein, mitochondrial precursor
CBP3 protein, mitochondrial {ECO:0000313|EMBL:BAE51154.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magneto
BD02T64_scaffold_340_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9440..9889
DNA (450bp) protein (150aa)
SmpA/OmlA domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K452_9PROT rbh
SmpA/OmlA domain-containing protein {ECO:0000313|EMBL:EKE77694.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="O
SmpA/OmlA domain-containing protein
BD02T64_scaffold_340_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9980..12085)
DNA (2106bp) protein (702aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
pyrophosphatase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B64F63
hppA; membrane-bound proton-translocating pyrophosphatase
BD02T64_scaffold_340_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12599..13132
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1385369 species="Ba
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY44_AZOS1 rbh
BD02T64_scaffold_340_13
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13200..14396)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000369F427 rbh
MFS transporter {ECO:0000313|EMBL:ERP85545.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
major facilitator family transporter
BD02T64_scaffold_340_14
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14437..14859)
DNA (423bp) protein (141aa)
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:GAK33359.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
BD02T64_scaffold_340_15
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14947..15507)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLL8_TISMK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK53656.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis
BD02T64_scaffold_340_16
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15626..16618)
DNA (993bp) protein (331aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX89_PARL1 rbh
thiamine-monophosphate kinase
BD02T64_scaffold_340_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16620..17102)
DNA (483bp) protein (161aa)
N utilization substance protein B homolog n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NTC3_AZOS1
nusB; N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=137722 species="Bacteria; Prote
BD02T64_scaffold_340_18
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17099..17569)
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMQ2_AZOBR
ribH; riboflavin synthase, beta subunit
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
BD02T64_scaffold_340_19
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17577..18689)
DNA (1113bp) protein (371aa)
GTP cyclohydrolase II (EC:3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HMR6_9PROT
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:EKV31593.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;
BD02T64_scaffold_340_20
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18691..19281)
DNA (591bp) protein (197aa)
Riboflavin synthase {ECO:0000313|EMBL:CDO61347.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CDO61347.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" sour
Riboflavin synthase subunit alpha n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0F973_9RHOB
ribC; riboflavin synthase, alpha subunit
BD02T64_scaffold_340_21
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19285..20367)
DNA (1083bp) protein (361aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4T0_MAGSA
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" sour
riboflavin biosynthesis protein ribD
BD02T64_scaffold_340_22
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20393..20854)
DNA (462bp) protein (154aa)
Transcriptional repressor NrdR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=NRDR_PARL1
ATP-cone domain-containing protein
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum l
BD02T64_scaffold_340_23
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20931..22226)
DNA (1296bp) protein (432aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVM9_9PROT rbh
BD02T64_scaffold_340_24
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22665..23132
DNA (468bp) protein (156aa)
YbaK/aminoacyl-tRNA synthetase associated region n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WYI4_RHIFR
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
YbaK/aminoacyl-tRNA synthetase associated region
BD02T64_scaffold_340_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23174..23416)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HX80_PARL1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS64513.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
BD02T64_scaffold_340_26
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23583..24779
DNA (1197bp) protein (399aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K462_9PROT
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EKE77709.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum
acyl-CoA dehydrogenase domain-containing protein
BD02T64_scaffold_340_27
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24902..25666
DNA (765bp) protein (255aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YHH1_9GAMM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EAW29702.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source=
oxidoreductase
BD02T64_scaffold_340_28
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25708..26496
DNA (789bp) protein (263aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJK58771.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AJK58771.1};; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;"
Enoyl-CoA hydratase/isomerase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3Q9C3_RHOPT
BD02T64_scaffold_340_29
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26548..27270)
DNA (723bp) protein (241aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I3U1_9BRAD
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJN14143.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
hypothetical protein
BD02T64_scaffold_340_30
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27339..27635
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGG8_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJR66905.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum th
hypothetical protein
Displaying items 1-30 of 109 in total

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