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BD02T64_scaffold_980

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Displaying items 1-30 of 100 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_980_1
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1..291
DNA (291bp) protein (97aa)
Putative Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G895_9CYAN
Putative Response regulator receiver modulated diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CBN58835.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriale
hypothetical protein
BD02T64_scaffold_980_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298..1431)
DNA (1134bp) protein (378aa)
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tRNA-guanine transglycosylase (Queuine/archaeosine tRNA-ribosyltransferase) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F460_9PROT rbh
BD02T64_scaffold_980_3
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1428..2459)
DNA (1032bp) protein (344aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036AC878
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
BD02T64_scaffold_980_4
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2531..3013)
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales
peptidyl-prolyl cis-trans isomerase family protein (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LGV3_9PROT rbh
BD02T64_scaffold_980_5
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3050..3568)
DNA (519bp) protein (173aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
phosphopantetheine adenylyltransferase n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B3F0E4 rbh
BD02T64_scaffold_980_6
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3632..6373)
DNA (2742bp) protein (914aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacte
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSC7_9RHOB
BD02T64_scaffold_980_7
Loktanella cinnabarina, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6557..7990)
DNA (1434bp) protein (478aa)
Trk system potassium uptake protein n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3AJ21_9RHOB rbh
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Lokt
potassium transporter TrkH
BD02T64_scaffold_980_8
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8115..8369)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JQT9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA04129.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC
putative type 1 capsular polysaccharide biosynthesis protein J
BD02T64_scaffold_980_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8519..8971
DNA (453bp) protein (151aa)
Transcription regulator, AsnC family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WA8_COLP3
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGJ95457.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
AsnC family transcriptional regulator
BD02T64_scaffold_980_10
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9057..9818
DNA (762bp) protein (254aa)
Short chain dehydrogenase {ECO:0000313|EMBL:EAQ47042.1}; EC=1.1.1.- {ECO:0000313|EMBL:EAQ47042.1};; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
linC; short chain dehydrogenase (EC:1.1.1.-)
Short chain dehydrogenase n=1 Tax=Roseobacter sp. MED193 RepID=A3X3K5_9RHOB
BD02T64_scaffold_980_11
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10225..11253
DNA (1029bp) protein (343aa)
Sulfonate ABC transporter, periplamic sulfonate-binding protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R516_9RHOB
Sulfonate ABC transporter, periplamic sulfonate-binding protein {ECO:0000313|EMBL:EEA94398.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; P
ssuA; putative aliphatic sulfonates-binding protein
BD02T64_scaffold_980_12
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11284..12081
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein n=1 Tax=Phaeobacter gallaeciensis (strain 2.10) RepID=I7DT00_PHAG2
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AFO88614.1}; TaxID=383629 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeo
BD02T64_scaffold_980_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12078..12884
DNA (807bp) protein (269aa)
Aliphatic sulfonates transport permease protein SsuC n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MT73_9RHIZ rbh
Aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:EKF20552.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireducto
ssuC; aliphatic sulfonates transport permease protein SsuC
BD02T64_scaffold_980_14

Not on your lists

13044..14567
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039F4898
Uncharacterized protein {ECO:0000313|EMBL:KKO03157.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_980_15
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14564..16435)
DNA (1872bp) protein (624aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YME0_9BRAD rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EHR04350.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.
AMP-binding protein
BD02T64_scaffold_980_16
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16525..17127)
DNA (603bp) protein (201aa)
UPI0003D6C6ED related cluster n=1 Tax=unknown RepID=UPI0003D6C6ED
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC35927.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
TetR family transcriptional regulator
BD02T64_scaffold_980_17
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17218..17808
DNA (591bp) protein (197aa)
NAD(P)H dehydrogenase, quinone family n=1 Tax=Ruegeria sp. R11 RepID=B7QV16_9RHOB
Quinone family NAD(P)H dehydrogenase {ECO:0000313|EMBL:KCV82588.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Ac
NAD(P)H dehydrogenase, quinone family
BD02T64_scaffold_980_18
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17880..18290
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B7681C
glutathione-dependent formaldehyde-activating protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
hypothetical protein
BD02T64_scaffold_980_19
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18365..18853
DNA (489bp) protein (163aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAM97769.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAM97769.1};; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-
Enoyl-CoA hydratase n=1 Tax=Citreicella sp. 357 RepID=I1ARA1_9RHOB
enoyl-CoA hydratase/isomerase
BD02T64_scaffold_980_20
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18828..19136
DNA (309bp) protein (103aa)
Enoyl-CoA hydratase n=1 Tax=Citreicella sp. 357 RepID=I1ARA1_9RHOB
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGY26501.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans
enoyl-CoA hydratase/isomerase
BD02T64_scaffold_980_21
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19210..19971)
DNA (762bp) protein (254aa)
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NCJ9_DESTT rbh
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:CCK82244.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="De
BD02T64_scaffold_980_22
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20232..20765)
DNA (534bp) protein (178aa)
Single-stranded DNA-binding protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QZI9_9RHOB
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=244592 species="Bacteria; Proteobacteria; Alph
ssb; ssDNA-binding protein
BD02T64_scaffold_980_23
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20967..23858
DNA (2892bp) protein (964aa)
UvrABC system protein A n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CQN9_9RHOB
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
Excinuclease ABC subunit A
BD02T64_scaffold_980_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23882..25228
DNA (1347bp) protein (449aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransfera
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUM1_AZOS1 rbh
gid; glucose inhibited division protein Gid
BD02T64_scaffold_980_25
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25370..26347
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWU6_RHOCS rbh
Uncharacterized protein {ECO:0000313|EMBL:EWY37892.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
hypothetical protein
BD02T64_scaffold_980_26
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26351..27220)
DNA (870bp) protein (290aa)
Putative phytoene synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXL4_PARL1
putative phytoene synthase
Putative phytoene synthase {ECO:0000313|EMBL:ABS64647.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamenti
BD02T64_scaffold_980_27
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27395..27988
DNA (594bp) protein (198aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
sodB; superoxide dismutase, Fe (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZ45_9PROT rbh
BD02T64_scaffold_980_28
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28042..29199
DNA (1158bp) protein (386aa)
TPR repeat n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q112K5_TRIEI
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
BD02T64_scaffold_980_29
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29254..29631)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EYG3_9PROT rbh
Valyl-tRNA synthetase {ECO:0000313|EMBL:KJS44564.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BR
hypothetical protein
BD02T64_scaffold_980_30
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29637..30590)
DNA (954bp) protein (318aa)
Protein-export membrane protein SecF n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RJX5_9RHIZ
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeoma
secF; Protein-export membrane protein secF
Displaying items 1-30 of 100 in total

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