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BD02T64_scaffold_2206

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2206_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178..933)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Z8V5_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH19970.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
BD02T64_scaffold_2206_2
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1286..1756
DNA (471bp) protein (157aa)
YtoQ family protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2KX89_9PROT rbh
YtoQ family protein {ECO:0000313|EMBL:EKF10329.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira pro
YtoQ family protein
BD02T64_scaffold_2206_3
unknown

Not on your lists

comp(1757..2416)
DNA (660bp) protein (220aa)

This feature has no annotations

BD02T64_scaffold_2206_4
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2416..2745)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IW83_RAHAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ59413.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchie
hypothetical protein
BD02T64_scaffold_2206_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2825..3424
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=mine drainage metagenome RepID=E6QFH4_9ZZZZ rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDQ09698.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
TetR family transcriptional regulator
BD02T64_scaffold_2206_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3431..4534)
DNA (1104bp) protein (368aa)
DNA alkylation repair enzyme family protein n=3 Tax=Clostridium difficile RepID=T4KGD3_CLODI
DNA alkylation repair enzyme family protein {ECO:0000313|EMBL:EQG77880.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
conserved hypothetical protein
BD02T64_scaffold_2206_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4713..5636
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037070BD
Putative transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EKE75789.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceani
LysR family transcriptional regulator
BD02T64_scaffold_2206_8
unknown

Not on your lists

5757..5951
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_2206_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5878..7050)
DNA (1173bp) protein (391aa)
Amidohydrolase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJZ6_9PROT rbh
Amidohydrolase {ECO:0000313|EMBL:EDP66933.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
amidohydrolase
BD02T64_scaffold_2206_10
unknown

Not on your lists

comp(7183..7425)
DNA (243bp) protein (81aa)

This feature has no annotations

BD02T64_scaffold_2206_11
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7885..12720
DNA (4836bp) protein (1612aa)
Glutamate dehydrogenase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MQQ8_9PROT
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:AJD53883.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="
NAD-specific glutamate dehydrogenase
BD02T64_scaffold_2206_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12797..14140
DNA (1344bp) protein (448aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VP8_RHOP5 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:GAK43657.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
major facilitator transporter
BD02T64_scaffold_2206_13
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14185..14499)
DNA (315bp) protein (105aa)
UPF0145 protein RLO149_c018550 n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZJL3_ROSLO
hypothetical protein
UPF0145 protein RLO149_c018550 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseoba
BD02T64_scaffold_2206_14
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14527..16125)
DNA (1599bp) protein (533aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037E6BBA
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
BD02T64_scaffold_2206_15
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16358..17674
DNA (1317bp) protein (439aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB27_MAGSA rbh
UDP-glucose dehydrogenase {ECO:0000313|EMBL:KIL97700.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetosp
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
BD02T64_scaffold_2206_16
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17671..19350)
DNA (1680bp) protein (560aa)
Heparinase II/III family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HSQ8_PARL1
heparinase II/III family protein
Heparinase II/III family protein {ECO:0000313|EMBL:ABS62941.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lav
BD02T64_scaffold_2206_17
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19350..19805)
DNA (456bp) protein (152aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rho
Ribulose-phosphate 3-epimerase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LLP9_9PROT
ribulose-phosphate 3-epimerase
BD02T64_scaffold_2206_18
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19816..19992)
DNA (177bp) protein (59aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000372B91D
ribulose-5-phosphate 3-epimerase
BD02T64_scaffold_2206_19
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20037..21293)
DNA (1257bp) protein (419aa)
tRNA and rRNA cytosine-C5-methylase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SBJ8_PHAFV rbh
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:EPY03287.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="
tRNA and rRNA cytosine-C5-methylase
BD02T64_scaffold_2206_20
Arion vulgaris, Arion, Gastropoda, Mollusca, Metazoa

Not on your lists

21388..21570
DNA (183bp) protein (61aa)
PREDICTED: UPF0369 protein C6orf57 homolog n=1 Tax=Aplysia californica RepID=UPI000359C35A rbh
Uncharacterized protein {ECO:0000313|EMBL:CEK84967.1}; TaxID=1028688 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Panpulmonata; Eupulmonata; Stylommat
hypothetical protein
BD02T64_scaffold_2206_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21581..22501)
DNA (921bp) protein (307aa)
Drug/metabolite transporter permease n=1 Tax=Oceanibaculum indicum P24 RepID=K2KEN3_9PROT rbh
Drug/metabolite transporter permease {ECO:0000313|EMBL:EKE75785.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="
drug/metabolite transporter permease
BD02T64_scaffold_2206_22
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22534..22947)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GP55_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV26927.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirill
hypothetical protein
BD02T64_scaffold_2206_23
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22951..23238)
DNA (288bp) protein (96aa)
YciI-like protein n=4 Tax=Brucella RepID=E0DNC1_9RHIZ
YCII-related domain protein
YCII-related {ECO:0000313|EMBL:ABY38748.1}; TaxID=470137 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis (strain ATCC 23445 / NCTC
BD02T64_scaffold_2206_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23265..24266)
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPP5_RHOCS
BD02T64_scaffold_2206_25
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24643..25125)
DNA (483bp) protein (161aa)
Histone acetyltransferase HPA2 n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE43_9GAMM
GNAT family acetyltransferase
GNAT family acetyltransferase {ECO:0000313|EMBL:AIF99181.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas
BD02T64_scaffold_2206_26
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25146..25820)
DNA (675bp) protein (225aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7J2_HYPSM
BD02T64_scaffold_2206_27
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25836..26891)
DNA (1056bp) protein (352aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHX4_9PROT rbh
BD02T64_scaffold_2206_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26958..27899
DNA (942bp) protein (314aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1M8_9PROT rbh
hemC; hydroxymethylbilane synthase
BD02T64_scaffold_2206_29
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27906..28763
DNA (858bp) protein (286aa)
uroporphyrinogen-III synthase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6E541
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:GAK43581.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
putative uroporphyrinogen-III synthase
BD02T64_scaffold_2206_30
unknown

Not on your lists

28723..29304
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying 30 items

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