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BD02T64_scaffold_1317

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Displaying items 1-30 of 89 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1317_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..119
DNA (117bp) protein (39aa)
Elongation factor Tu (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV86_9RHIZ
Elongation factor Tu {ECO:0000313|EMBL:EHK55343.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
tuf; elongation factor Tu
BD02T64_scaffold_1317_2
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


177..491
DNA (315bp) protein (105aa)
30S ribosomal protein S10 n=1 Tax=Kiloniella laminariae RepID=UPI0003782C6B
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluco
BD02T64_scaffold_1317_3
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


498..1229
DNA (732bp) protein (244aa)
50S ribosomal protein L3 n=1 Tax=Rhodobacteraceae bacterium HIMB11 RepID=U4V7C5_9RHOB
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteriu
rplC; 50S ribosomal protein L3
BD02T64_scaffold_1317_4
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1243..1863
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=2 Tax=Phaeospirillum RepID=H8FN03_PHAMO rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeosp
rplD; 50S ribosomal subunit protein L4
BD02T64_scaffold_1317_5
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1860..2153
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNY0_TISMK rbh
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; T
BD02T64_scaffold_1317_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2156..2992
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036F1BBB rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
rplB; 50S ribosomal protein L2
BD02T64_scaffold_1317_7
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3003..3281
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MH07_9PROT rbh
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalass
BD02T64_scaffold_1317_8
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3284..3664
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B4662D
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
rplV; 50S ribosomal subunit protein L22
BD02T64_scaffold_1317_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3664..4374
DNA (711bp) protein (237aa)
30S ribosomal protein S3 n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00035F0FEF
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanell
rpsC; 30S ribosomal protein S3
BD02T64_scaffold_1317_10
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4392..4811
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNX5_TISMK
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; T
BD02T64_scaffold_1317_11

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4814..5005
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QZQ1_9RHOB
Marine sediment metagenome DNA, contig: S01H1_L08022 {ECO:0000313|EMBL:GAF80368.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rpmC; 50S ribosomal protein L29
BD02T64_scaffold_1317_12
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5017..5253
DNA (237bp) protein (79aa)
30S ribosomal protein S17 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MH03_9PROT rbh
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; T
BD02T64_scaffold_1317_13
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5290..5658
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Acetobacter sp. CAG:977 RepID=R5Q5I3_9PROT rbh
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Ac
rplN; 50S ribosomal subunit protein L14
BD02T64_scaffold_1317_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5658..5981
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Oceanibaculum indicum P24 RepID=K2K8G2_9PROT rbh
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanib
rplX; 50S ribosomal protein L24
BD02T64_scaffold_1317_15
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5993..6541
DNA (549bp) protein (183aa)
50S ribosomal protein L5 n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037254BD
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
rplE; 50S ribosomal protein L5
BD02T64_scaffold_1317_16
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6560..6865
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JG76_9PROT rbh
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanib
30S ribosomal protein S14
BD02T64_scaffold_1317_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6880..7278
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acetobacter sp. CAG:977 RepID=R5PZA6_9PROT rbh
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
BD02T64_scaffold_1317_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7287..7820
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EC88AD rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
50S ribosomal protein L6
BD02T64_scaffold_1317_19
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7830..8192
DNA (363bp) protein (121aa)
UPI0003D06463 related cluster n=1 Tax=unknown RepID=UPI0003D06463 rbh
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
50S ribosomal protein L18
BD02T64_scaffold_1317_20
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8205..8753
DNA (549bp) protein (183aa)
30S ribosomal protein S5 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS5_PARL1
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamen
BD02T64_scaffold_1317_21
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8746..8940
DNA (195bp) protein (65aa)
50S ribosomal protein L30 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRS4_RHOCS rbh
rpmD; 50S ribosomal subunit protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; M
BD02T64_scaffold_1317_22
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8970..9449
DNA (480bp) protein (160aa)
50S ribosomal protein L15 n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CP02_9RHOB rbh
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rose
rplO; 50S ribosomal protein L15
BD02T64_scaffold_1317_23
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9506..10852
DNA (1347bp) protein (449aa)
Protein translocase subunit SecY n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT48_9PROT rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
preprotein translocase subunit SecY
BD02T64_scaffold_1317_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10849..11499
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2K8I4_9PROT
BD02T64_scaffold_1317_25
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11603..11971
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNW0_TISMK rbh
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella m
BD02T64_scaffold_1317_26
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11973..12362
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00030E73A4
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1002340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera s
30S ribosomal protein S11
BD02T64_scaffold_1317_27
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12455..13465
DNA (1011bp) protein (337aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:KJB96789.1}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rul
DNA-directed RNA polymerase subunit alpha n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B43DE8
rpoA; DNA-directed RNA polymerase subunit alpha
BD02T64_scaffold_1317_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13520..13954
DNA (435bp) protein (145aa)
50S ribosomal protein L17 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT54_9PROT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; O
50S ribosomal protein L17
BD02T64_scaffold_1317_29
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14326..15756
DNA (1431bp) protein (477aa)
degP; putative serine protease (DegP periplasmic, membrane-associated serine endoprotease, protease Do), containing two PDZ domains (EC:3.4.21.-)
Putative serine protease (DegP periplasmic, membrane-associated serine endoprotease, protease Do), containing two PDZ domains {ECO:0000313|EMBL:CCQ74578.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCQ74578.1};;
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0K9_9PROT
BD02T64_scaffold_1317_30
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15753..17069
DNA (1317bp) protein (439aa)
ATPase, AAA family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QXW0_9RHOB
ATPase, AAA family protein {ECO:0000313|EMBL:EEE47094.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexand
rarA; Replication-associated recombination protein A
Displaying items 1-30 of 89 in total

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