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BD02T64_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 261 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_29_1
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2795)
DNA (2793bp) protein (931aa)
DNA gyrase subunit A {ECO:0000313|EMBL:CDO58988.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CDO58988.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" so
Calcium-binding RTX toxin-like protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N667_9BURK rbh
calcium-binding RTX toxin-like protein
BD02T64_scaffold_29_2
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3141..4982
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000366AFF7
ABC-type multidrug transport system {ECO:0000313|EMBL:CDO58987.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinob
putative hlyB(ABC transporter, ATP-binding protein)
BD02T64_scaffold_29_3
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4982..7195
DNA (2214bp) protein (738aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003677C36 rbh
Toxin secretion ATP-binding protein {ECO:0000313|EMBL:CDO58986.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinob
Toxin secretion ATP-binding protein
BD02T64_scaffold_29_4
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7368..8723
DNA (1356bp) protein (452aa)
Membrane-fusion protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4P3_MAGSA rbh
HlyD family secretion protein {ECO:0000313|EMBL:CDO58985.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter
membrane-fusion protein
BD02T64_scaffold_29_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8761..9441)
DNA (681bp) protein (227aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {EC
ATP-dependent dethiobiotin synthetase BioD n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP30_PARL1 rbh
dethiobiotin synthase
BD02T64_scaffold_29_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..10610)
DNA (1173bp) protein (391aa)
8-amino-7-oxononanoate synthase {ECO:0000256|SAAS:SAAS00087543}; EC=2.3.1.47 {ECO:0000256|SAAS:SAAS00087543};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha pro
Putative 8-amino-7-oxononanoate synthase n=2 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=BIOF_PARL1 rbh
8-amino-7-oxononanoate synthase
BD02T64_scaffold_29_7
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10987..12018
DNA (1032bp) protein (344aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1333998 species="Bacteria; Proteob
biotin synthase n=1 Tax=Parvibaculum lavamentivorans RepID=UPI0000ED462E rbh
biotin synthase
BD02T64_scaffold_29_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12121..13422
DNA (1302bp) protein (434aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP23_PARL1 rbh
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:ABS61656.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;
BD02T64_scaffold_29_9
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13646..14314
DNA (669bp) protein (223aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP22_PARL1 rbh
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ABS61655.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum l
BD02T64_scaffold_29_10
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14320..15399
DNA (1080bp) protein (360aa)
Sporulation domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP21_PARL1 rbh
Sporulation domain-containing protein {ECO:0000313|EMBL:GAK43872.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
sporulation domain-containing protein
BD02T64_scaffold_29_11
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15566..16207
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase, phosphatase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP20_PARL1 rbh
HAD family phosphatase {ECO:0000313|EMBL:GAK43871.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
HAD family phosphatase
BD02T64_scaffold_29_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16263..17723)
DNA (1461bp) protein (487aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Catalase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUF3_9GAMM rbh
catalase
BD02T64_scaffold_29_13
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17864..18292)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003769568
Protein YhgI {ECO:0000313|EMBL:GAK43868.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
BD02T64_scaffold_29_14
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18442..20799)
DNA (2358bp) protein (786aa)
Putative exporter of RND superfamily n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP17_PARL1 rbh
RND superfamily exporter {ECO:0000313|EMBL:GAK43867.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
RND superfamily exporter
BD02T64_scaffold_29_15
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21353..22261
DNA (909bp) protein (303aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP12_PARL1 rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:GAK43865.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aminoglycoside phosphotransferase
BD02T64_scaffold_29_16
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22258..22743
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP11_PARL1 rbh
Conserved protein {ECO:0000313|EMBL:GAK43864.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
BD02T64_scaffold_29_17
unknown

Not on your lists

comp(22751..23158)
DNA (408bp) protein (136aa)

This feature has no annotations

BD02T64_scaffold_29_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23197..23763)
DNA (567bp) protein (189aa)
Two component transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP08_PARL1 rbh
two component Fis family transcriptional regulator
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS61641.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" sourc
BD02T64_scaffold_29_19
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23948..25300)
DNA (1353bp) protein (451aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP07_PARL1 rbh
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:GAK43862.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;
integral membrane sensor signal transduction histidine kinase
BD02T64_scaffold_29_20
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25380..26477)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP06_PARL1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS61639.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
BD02T64_scaffold_29_21
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26544..27107)
DNA (564bp) protein (188aa)
Ankyrin repeat-containing protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSD6_AZOS1
Ankyrin {ECO:0000313|EMBL:GAK43860.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
ankyrin repeat-containing protein
BD02T64_scaffold_29_22
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27374..28006
DNA (633bp) protein (211aa)
Classical-complement-pathway C3/C5 convertase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP04_PARL1 rbh
Classical-complement-pathway C3/C5 convertase {ECO:0000313|EMBL:GAK43859.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Classical-complement-pathway C3/C5 convertase
BD02T64_scaffold_29_23
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28116..29345
DNA (1230bp) protein (410aa)
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP02_PARL1 rbh
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:GAK43858.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
polyhydroxyalkanoate depolymerase
BD02T64_scaffold_29_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29443..30183
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP00_PARL1 rbh
Conserved protein {ECO:0000313|EMBL:GAK43856.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
BD02T64_scaffold_29_25
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30193..32592)
DNA (2400bp) protein (800aa)
Penicillin-binding protein, 1A family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ8_PARL1 rbh
1A family penicillin-binding protein {ECO:0000313|EMBL:GAK43855.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
1A family penicillin-binding protein
BD02T64_scaffold_29_26
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32981..35446)
DNA (2466bp) protein (822aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1333998 species="Bacteria; P
DNA gyrase subunit B n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ7_PARL1 rbh
DNA gyrase subunit B
BD02T64_scaffold_29_27
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35479..36696)
DNA (1218bp) protein (406aa)
DNA replication and repair protein RecF n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ5_PARL1 rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteoba
DNA replication and repair protein RecF
BD02T64_scaffold_29_28
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36712..37830)
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1333998 species="Bacte
DNA polymerase III subunit beta n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HNZ4_PARL1 rbh
DNA polymerase III subunit beta
BD02T64_scaffold_29_29
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38433..40172)
DNA (1740bp) protein (580aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVU9_RHOCS rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha p
dnaA; chromosomal replication initiation protein
BD02T64_scaffold_29_30
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40277..40765)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00038189C1 rbh
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CDO59897.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinob
rhodanese domain-containing protein
Displaying items 1-30 of 261 in total

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