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BD02T64_scaffold_767

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_767_1
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
Transposase (Class V) n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EGN1_9RHOB
Transposase (Class V) {ECO:0000313|EMBL:EDQ02939.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indoli
putative IS3-family transposase
BD02T64_scaffold_767_2
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(665..814)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RBC7_KANKD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV26569.1}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensi
BD02T64_scaffold_767_3

Not on your lists

comp(1162..2436)
DNA (1275bp) protein (425aa)
Membrane protein n=2 Tax=Mesorhizobium RepID=V7FX48_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN29740.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_767_4
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3043..4476)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUB0_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ04106.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
mechanosensitive ion channel MscS
BD02T64_scaffold_767_5
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4539..5015)
DNA (477bp) protein (159aa)
UPI0003D1B553 related cluster n=1 Tax=unknown RepID=UPI0003D1B553 rbh
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51994.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteracea
hypothetical protein
BD02T64_scaffold_767_6
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5202..6188
DNA (987bp) protein (329aa)
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVR8_RUEPO
D-isomer specific 2-hydroxyacid dehydrogenase family protein
D-isomer specific 2-hydroxyacid dehydrogenase family protein {ECO:0000313|EMBL:AAV93940.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rueg
BD02T64_scaffold_767_7
unknown

Not on your lists

6407..6817
DNA (411bp) protein (137aa)

This feature has no annotations

BD02T64_scaffold_767_8
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6824..7633)
DNA (810bp) protein (270aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB1; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D853_9RHOB rbh
BD02T64_scaffold_767_9
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7630..8475)
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D854_9RHOB rbh
BD02T64_scaffold_767_10
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9115..11607
DNA (2493bp) protein (831aa)
Aminomethyl transferase family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TV14_9RHOB rbh
Diguanylate cyclase {ECO:0000313|EMBL:KGM47633.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S1
dimethylglycine dehydrogenase
BD02T64_scaffold_767_11
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11963..12304)
DNA (342bp) protein (114aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
4-carboxymuconolactone decarboxylase domain/ alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CV06_9RHOB rbh
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
BD02T64_scaffold_767_12
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12417..13493)
DNA (1077bp) protein (359aa)
Oxidoreductase, FAD-binding protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVQ8_RUEPO
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:KAJ55083.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Acti
oxidoreductase, FAD-binding protein
BD02T64_scaffold_767_13
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13632..14720)
DNA (1089bp) protein (363aa)
UPI0003D6CBF8 related cluster n=1 Tax=unknown RepID=UPI0003D6CBF8
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM47624.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="
DNA-binding protein
BD02T64_scaffold_767_14
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14758..15678)
DNA (921bp) protein (307aa)
Sugar ABC transporter, permease protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUZ5_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KGM47623.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22
inner-membrane translocator
BD02T64_scaffold_767_15
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15678..16760)
DNA (1083bp) protein (361aa)
Sugar ABC transporter, permease protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUZ4_9RHOB rbh
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:EAQ04340.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oce
sugar ABC transporter, permease protein
BD02T64_scaffold_767_16
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16747..18270)
DNA (1524bp) protein (508aa)
Sugar ABC transporter, ATP-binding protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X5H8_9RHOB
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EAQ47351.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source=
sugar ABC transporter, ATP-binding protein
BD02T64_scaffold_767_17
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18267..19229)
DNA (963bp) protein (321aa)
Molybdenum cofactor sulfurylase n=1 Tax=Ruegeria mobilis F1926 RepID=R0EYA9_9RHOB
Molybdenum cofactor sulfurylase {ECO:0000313|EMBL:ENZ90408.1}; TaxID=1265309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mob
molybdenum cofactor sulfurylase
BD02T64_scaffold_767_18
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19219..21528)
DNA (2310bp) protein (770aa)
xdhB; xanthine dehydrogenase, B subunit (EC:1.17.1.4)
Xanthine dehydrogenase, B subunit {ECO:0000313|EMBL:AAV93961.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AAV93961.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
Xanthine dehydrogenase, B subunit n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVP7_RUEPO
BD02T64_scaffold_767_19
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21525..22979)
DNA (1455bp) protein (485aa)
xdhA; xanthine dehydrogenase, A subunit (EC:1.17.1.4)
Xanthine dehydrogenase, small subunit n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CV19_9RHOB
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KAJ55090.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source=
BD02T64_scaffold_767_20
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23173..23484)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LKT6_DINSH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV93300.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacte
BD02T64_scaffold_767_21
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23658..27104
DNA (3447bp) protein (1149aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobact
dnaE; DNA polymerase III, alpha subunit (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Ruegeria conchae RepID=UPI000237A9D2
BD02T64_scaffold_767_22
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27263..28564
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AWT0_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ44159.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacte
hypothetical protein
BD02T64_scaffold_767_23
unknown

Not on your lists

28697..29035
DNA (339bp) protein (113aa)

This feature has no annotations

BD02T64_scaffold_767_24
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


29082..30599
DNA (1518bp) protein (506aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase HisS (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FPE6_9RHOB rbh
BD02T64_scaffold_767_25
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30599..31681
DNA (1083bp) protein (361aa)
Histidyl-tRNA synthetase-like protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVN2_RUEPO
histidyl-tRNA synthetase-like protein
Histidyl-tRNA synthetase-like protein {ECO:0000313|EMBL:AAV93976.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeri
BD02T64_scaffold_767_26
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31678..32373
DNA (696bp) protein (232aa)
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00046302}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
ATP phosphoribosyltransferase catalytic subunit n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FPE4_9RHOB rbh
hisG; ATP phosphoribosyltransferase
BD02T64_scaffold_767_27
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32378..32809)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Sulfitobacter RepID=A3SEJ6_9RHOB
Lysophospholipase {ECO:0000313|EMBL:KFC25525.1}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. CB2
hypothetical protein
BD02T64_scaffold_767_28
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33015..35279
DNA (2265bp) protein (755aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CV27_9RHOB
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:KCV82939.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Ac
ribonucleoside-diphosphate reductase, putative
BD02T64_scaffold_767_29
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35838..36599)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FJG0_PELBH rbh
Uncharacterized protein {ECO:0000313|EMBL:EAU44316.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermuden
glutaredoxin
BD02T64_scaffold_767_30
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36610..37434)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FJF9_PELBH rbh
Uncharacterized protein {ECO:0000313|EMBL:EAU44317.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermuden
hypothetical protein
Displaying items 1-30 of 43 in total

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