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BD02T64_scaffold_2062

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2062_1
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..285
DNA (285bp) protein (95aa)
Elongation factor Tu n=1 Tax=Octadecabacter arcticus 238 RepID=B5K196_9RHOB
tufA; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacter
BD02T64_scaffold_2062_2
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

708..1676
DNA (969bp) protein (323aa)
Mg2+ transporter protein, CorA family protein n=1 Tax=Citreicella sp. SE45 RepID=D0D0F5_9RHOB rbh
Mg2+ transporter protein, CorA family protein {ECO:0000313|EMBL:EEX17009.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" sour
Mg2+ transporter protein, CorA family protein
BD02T64_scaffold_2062_3
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1783..2460
DNA (678bp) protein (226aa)
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:AKI00946.1}; EC=2.3.1.- {ECO:0000313|EMBL:AKI00946.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Rhizobium sp. CF080 RepID=J3BJ79_9RHIZ
acetyltransferase
BD02T64_scaffold_2062_4
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2759..2956
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMZ0_9RHOB rbh
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseo
preprotein translocase, SecE subunit, bacterial
BD02T64_scaffold_2062_5
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3212..3832
DNA (621bp) protein (207aa)
Transcription termination/antitermination protein NusG n=1 Tax=Roseovarius sp. 217 RepID=A3W797_9RHOB rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobact
nusG; transcription antitermination protein NusG
BD02T64_scaffold_2062_6
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3937..4362
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Roseobacter sp. MED193 RepID=A3X647_9RHOB
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
50S ribosomal protein L11
BD02T64_scaffold_2062_7
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4362..5057
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMZ4_9RHOB
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria
rplA; ribosomal protein L1
BD02T64_scaffold_2062_8
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5307..5822
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6AVL2_9RHOB rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" so
rplJ; 50S ribosomal protein L10
BD02T64_scaffold_2062_9
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5895..6272
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LLK5_DINSH rbh
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Plankto
BD02T64_scaffold_2062_10
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6524..10660
DNA (4137bp) protein (1379aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta n=2 Tax=Ruegeria lacuscaerulensis RepID=D0CUI5_9RHOB rbh
BD02T64_scaffold_2062_11
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10716..14960
DNA (4245bp) protein (1415aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Phaeobacter RepID=I7EIF0_PHAIB rbh
BD02T64_scaffold_2062_12
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15422..16318
DNA (897bp) protein (299aa)
Membrane protein, putative n=1 Tax=Roseovarius sp. 217 RepID=A3VZ82_9RHOB rbh
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KGM87594.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ro
hypothetical protein
BD02T64_scaffold_2062_13
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16315..17139)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TU73_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGM47522.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22I
hypothetical protein
BD02T64_scaffold_2062_14
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17574..17945
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=8 Tax=Rhodobacteraceae RepID=RS12_RUEST rbh
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pha
BD02T64_scaffold_2062_15
Rhodobacteraceae bacterium HIMB11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17958..18428
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Oceanicola sp. S124 RepID=UPI000255810B rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1366046 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacteriu
rpsG; 30S ribosomal protein S7
BD02T64_scaffold_2062_16
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18456..20576
DNA (2121bp) protein (707aa)
Elongation factor G n=2 Tax=Phaeobacter RepID=I7DIG6_PHAG2 rbh
fusA; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
BD02T64_scaffold_2062_17
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20640..20825
DNA (186bp) protein (62aa)
Elongation factor Tu n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDP9_9RHOB
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacte
Displaying 17 items

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