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BD02T64_scaffold_2126

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2126_1

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comp(41..931)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6KV34_9BACT
LysR family transcriptional regulator {ECO:0000313|EMBL:BAH89832.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
LysR family transcriptional regulator
BD02T64_scaffold_2126_2
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..1634
DNA (642bp) protein (214aa)
Coenzyme F420-dependent NADP oxidoreductase n=1 Tax=uncultured bacterium RepID=C6KV35_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KEO50755.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
NADP oxidoreductase coenzyme F420-dependent protein
BD02T64_scaffold_2126_3

Not on your lists

1662..2084
DNA (423bp) protein (141aa)
DoxX family membrane protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XE33_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM81713.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DoxX family protein
BD02T64_scaffold_2126_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2145..3008
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X1S5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ33814.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
glyoxalase/bleomycin resistance protein/dioxygenase
BD02T64_scaffold_2126_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3019..3957
DNA (939bp) protein (313aa)
glutathione S-transferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B73369 rbh
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:EGP55696.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
BD02T64_scaffold_2126_6
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4556..5155)
DNA (600bp) protein (200aa)
SAM-dependent methyltransferase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FS36_PELBH rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:EAU46923.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca
SAM-dependent methyltransferase
BD02T64_scaffold_2126_7
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5173..6891)
DNA (1719bp) protein (573aa)
sulfate:proton symporter n=1 Tax=Loktanella vestfoldensis RepID=UPI00036CFC39 rbh
Sulfate:proton symporter {ECO:0000313|EMBL:KEJ90775.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter
sulfate transporter
BD02T64_scaffold_2126_8
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6945..8618)
DNA (1674bp) protein (558aa)
Sulfide:quinone oxidoreductase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGE9_9RHOB rbh
Sulfide:quinone oxidoreductase {ECO:0000313|EMBL:EEB86344.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
sqrD; sulfide:quinone oxidoreductase
BD02T64_scaffold_2126_9
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8635..9540)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZJ7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO55274.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica
hypothetical protein
BD02T64_scaffold_2126_10
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9643..10128)
DNA (486bp) protein (162aa)
Bacterioferritin {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
bacterioferritin n=1 Tax=Ahrensia kielensis RepID=UPI00036E5959 rbh
bfr; bacterioferritin
BD02T64_scaffold_2126_11
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10162..11046)
DNA (885bp) protein (295aa)
Metallo-beta-lactamase family protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGE7_9RHOB rbh
Beta-lactamase {ECO:0000313|EMBL:KEJ90773.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicola
beta-lactamase hydrolase-like protein rbh
BD02T64_scaffold_2126_12
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11085..11252)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAD8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KCV83584.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium a
BD02T64_scaffold_2126_13
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11249..11680)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16C28_ROSDO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG30465.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitr
BD02T64_scaffold_2126_14
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11684..12121)
DNA (438bp) protein (146aa)
YeeE/YedE domain protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16C27_ROSDO rbh
hypothetical protein
YeeE/YedE domain protein {ECO:0000313|EMBL:ABG30466.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denit
BD02T64_scaffold_2126_15
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12118..12330)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JR17_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA04207.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC
hypothetical protein
BD02T64_scaffold_2126_16
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12416..13087)
DNA (672bp) protein (224aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9Q6M1_9RHOB rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KEJ90771.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source
cyclic nucleotide-binding protein
BD02T64_scaffold_2126_17
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13084..13548)
DNA (465bp) protein (155aa)
Rrf2 family transcriptional regulator n=1 Tax=Loktanella vestfoldensis RepID=UPI0003654B72 rbh
HTH-type transcriptional regulator NsrR {ECO:0000313|EMBL:EEB82976.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Ro
hypothetical protein
BD02T64_scaffold_2126_18
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13654..14280
DNA (627bp) protein (209aa)
Peroxiredoxin-like protein (EC:1.11.1.-)
Probable antioxidant protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZI7_9RHOB rbh
Peroxidase {ECO:0000313|EMBL:KEJ90769.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicola DSW
BD02T64_scaffold_2126_19
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14308..15717
DNA (1410bp) protein (470aa)
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-) rbh
Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGE1_9RHOB rbh
Cytochrome bd ubiquinol oxidase, subunit I {ECO:0000313|EMBL:EEB85433.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source=
BD02T64_scaffold_2126_20
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15728..16729
DNA (1002bp) protein (334aa)
cydB; cytochrome d ubiquinol oxidase subunit 2 (EC:1.10.3.-) rbh
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGE0_9RHOB rbh
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EEB84919.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source=
BD02T64_scaffold_2126_21
unknown

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16729..16839
DNA (111bp) protein (37aa)

This feature has no annotations

BD02T64_scaffold_2126_22
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16868..17308
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9Q7U6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EPX77451.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter a
hypothetical protein
BD02T64_scaffold_2126_23
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17530..18456)
DNA (927bp) protein (309aa)
Hydrogen peroxide sensing transcriptional regulator n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LTG5_DINSH rbh
LysR family transcriptional regulator rbh
Hydrogen peroxide sensing transcriptional regulator {ECO:0000313|EMBL:ABV95532.1}; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobact
BD02T64_scaffold_2126_24
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18564..20741
DNA (2178bp) protein (726aa)
Catalase-peroxidase {ECO:0000255|HAMAP-Rule:MF_01961}; Short=CP {ECO:0000255|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000255|HAMAP-Rule:MF_01961};; Peroxidase/catalase {ECO:0000255|HAMAP-Rule:MF_0196
Catalase-peroxidase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=KATG_DINSH rbh
catalase/peroxidase HPI rbh
BD02T64_scaffold_2126_25
unknown

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20794..21468
DNA (675bp) protein (225aa)

This feature has no annotations

BD02T64_scaffold_2126_26
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21784..23169)
DNA (1386bp) protein (462aa)
ISPsy22, transposase truncated n=1 Tax=Roseovarius sp. 217 RepID=A3W689_9RHOB rbh
ISPsy22, transposase truncated {ECO:0000313|EMBL:EAQ23725.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius
transposase
BD02T64_scaffold_2126_27
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23279..24385)
DNA (1107bp) protein (369aa)
Type IV secretion system coupling protein n=1 Tax=Roseovarius sp. 217 RepID=A3W914_9RHOB
Type VI secretion protein {ECO:0000313|EMBL:KJS42339.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp.
hypothetical protein
Displaying 27 items

View Taxonomy