ggKbase home page

BD02T64_scaffold_12_24

Organism: BD02T64_Rhodobacterales_59_46

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 25668..28592

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=391624 species="Bacteria; Proteobacteria; Alp similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 990.0
  • Bit_score: 1208
  • Evalue 0.0
ribonuclease, Rne/Rng family (EC:3.4.24.-) similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 999.99
  • Bit_score: 1188
  • Evalue 0.0
Ribonuclease E n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E573_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 990.0
  • Bit_score: 1208
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oceanibulbus indolifex → Oceanibulbus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2925
ATGGCTAAGAAAATGCTCATCGATGCCACCCACGTGGAAGAGACCCGCGTCGTGGTGGTGGACGGAAACAAGGTTGAGGAGTTCGACTTTGAATCCGAAAACCGGCGCCAGCTTGCTGGCAACATTTATCTCGCAAAAGTAACGCGCGTCGAACCCTCGCTTCAGGCGGCGTTCGTGGATTATGGCGGCAACCGTCACGGGTTCCTCGCCTTTTCGGAAATCCACCCGGATTACTACCAGATCCCCATCGCGGACCGTGAGGCCCTGATGGAGGAAGAGCGCGCCTATGCCGAAGCGCAAAGCGCCCGCGAAGAGGACGACGAAAAACCCAAACGTGGCCGTCGCCGTCGCAGCCGCTCTAAAGCATCAGAGGCACAAAGCGACGATGCCATCGCGACCAAAGAGGTCGATGCACAGACATCCGCAGACGGCGTGTCCGGCATGGAGACGATCAATCTCGATGAGGACACACCGCATGTCGACGTGCCCGAAGGCACATCGCCGATGGAAACGGTCGCCGAAACTCCGGTAGAAGAACCGGCAGAAGAGGCGAGCACCGACAGTGCCGATCATGGTGGTGCCGATCATGATGAGGATCACAGCAGCGAGGACGACACCGAGGCCAAGGCAGCCGATGCCGCCGACAAAGACGCCAGCATCGAATCCGTGGCCGACGAAGACGACAGCGAAGACATCCGCCCCCCGCGCAAACCCCGTGCCCGTCGCTATAAAATCCAAGAAGTCATCAAAGTGCGCCAAATCCTGTTGGTGCAGGTCGTCAAGGAAGAGCGCGGCAACAAAGGCGCGGCGCTGACCACATATTTGTCGTTGGCGGGGCGCTATTGCGTTCTTATGCCCAACACCGCACGCGGCGGCGGCATCAGCCGCAAAATCACCTCTGCGGATGATCGCAAGAAACTCAAAGAGATCGCGCATGAAATCGACGTGCCGAAGGGCGCGGGTCTCATTGTTCGCACGGCGGGCGCGAAGCGCACCAAATCCGAGATCAAGCGTGATTACGAATATTTGCAACGGATGTGGGAACAGATCCGTGAATTGACCCTCAAATCCATCGCCCCTGCGAAGATTTACGAGGAGGGTGATTTGATCAAACGCTCGATCCGCGACCTTTATAACCGCGAGATTGACGAAGTGTTTGTCGAAGGCGAACGCGGCTACCGCATCGCCAAGGACTTCATGAAAATGATCATGCCGTCCCACGCCAAAAACGTGAAACGCTATGAGGATAGCCTGCCGCTTTTTGCGCGCTATCAGGTGGAAAGCTACCTCAGCTCGATGTTCAACCCGACGGTGCAATTGAAATCCGGCGGATATATCGTCATCGACGTGACCGAAGCACTTGTTGCGATCGACGTGAACTCCGGCCGTGCCACCAAAGAAGGCTCGATCGAGGACACCGCGACCAAAACCAACCTCGAAGCCGCCGAAGAAGTGGCGCGTCAATTGCGCTTGCGTGACCTTGCCGGTTTGATCGTGATCGATTTCATCGACATGGACGAACGGCGCAACAATGCCGCCGTTGAAAAACGCATGAAGGACAAATTGAAAACCGACCGTGCCCGTATTCAGGTCGGCCGCATTTCCGGTTTTGGCCTTATGGAGATGAGCCGTCAACGTTTGCGCCCCGGCATGATTGAGGCCACGACACAGCCTTGCCCCTCGTGCCACGGTACCGGTTTGATCCGTTCGGATGACAACCTCGCCTTGTCGATCCTGCGCCAGATCGAAGAAGAAGGCACGCGCCGCCGCACCCGTGAGGTTTTGGTCAAATGCCCTGTTGGCATTGCCAATTTCTTGATGAACCACAAGCGCGAGCATGTGGCGCAAATCGAAAGCCGCTATGGCATGTCGGTACGGGTTGAAGGCGATCCGATGCTGATCTCGCCGGATTTCAGCATCGAGAAGTTCAAAACCGCAACCCGCGTTGTCGCCGAAGCGACTGCGCCGGTGGTCTCGGTTGATAATTCCTTGATGGACCAGATCGACGAAGACGCCGCTGCCGAAGCCGATGAGGCCGAGGCCCGCGAATTGGCCGCAGAAGCAGAGGCCGAAGCCAGTGAAGCGGCGCGCGGTGCATCTGACCCGGCGGCGGGAGACACGGACAGCGAAGAGCGTCCGAAGAAACGGCGCCGTCGGCGTCGGCGTCGGTCCAAGAACGGCAACGGTGAGAACGCCGAGAACGGCGGCGACAACAGCTCCGAAGAGCAGCGCGCAGAGGCCGCGCCGACAGAGGACACAGACGCGCCGCAAACTGCTGAAAGCGTAGAACCCGAGGCCGACGCCGCAGCGCAGACCAAAGCAGACACGCTTGACGAGACCCCCAAGCCGAAGCGCACGCGCCGTCCGCGTAAAAAGCCCGAAGCCGCAGCAGAGGTTCCGGAAGATGCCGAGGGTCAAGCGACCCCGGCCGCGGCAGAGGCACCCGCCGAGGCCACGCCCGAGGTCGAGGCCGAAAAGCCCAAACGCCGCACGCGCACCCGTAAGCCAAAGGCGGCAGCCGCAGACGCAGCGCCGGTAGAGACGCCTGAAGTTGCGGCCGAAGGCGAGCCTGCGGCAGAGGAAAAGCCTAAGCCCAAACGCCGTTCGCGTGCCAAGAAGAAACCGGAAGCGGTGGCCGATGCCACGGTGGACGCACCTGCCGCCCCGGCGCCCGAGGCCGTGAAGGCAGAGGCTCCGAAGGCAGAGGCTCCGAAGGCGGAGGCGACGCCGGAGGTTGCTGATCAGGCCACAGCCAAGGATGAAACGCCGGCGCCGGTGGTGCCAGAGACCGTGCCAGAGCCTGCACCTATCGCGGAACCTGCACCTGCACCTGTCGCAGAACCGGCGGCGGTGACCACAGACACCGAGGCCGAAGAGGGCACAAGCAAGCCCAAGCGTAAAGGCTGGTGGTCCTTGGGCCGCTAA
PROTEIN sequence
Length: 975
MAKKMLIDATHVEETRVVVVDGNKVEEFDFESENRRQLAGNIYLAKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPIADREALMEEERAYAEAQSAREEDDEKPKRGRRRRSRSKASEAQSDDAIATKEVDAQTSADGVSGMETINLDEDTPHVDVPEGTSPMETVAETPVEEPAEEASTDSADHGGADHDEDHSSEDDTEAKAADAADKDASIESVADEDDSEDIRPPRKPRARRYKIQEVIKVRQILLVQVVKEERGNKGAALTTYLSLAGRYCVLMPNTARGGGISRKITSADDRKKLKEIAHEIDVPKGAGLIVRTAGAKRTKSEIKRDYEYLQRMWEQIRELTLKSIAPAKIYEEGDLIKRSIRDLYNREIDEVFVEGERGYRIAKDFMKMIMPSHAKNVKRYEDSLPLFARYQVESYLSSMFNPTVQLKSGGYIVIDVTEALVAIDVNSGRATKEGSIEDTATKTNLEAAEEVARQLRLRDLAGLIVIDFIDMDERRNNAAVEKRMKDKLKTDRARIQVGRISGFGLMEMSRQRLRPGMIEATTQPCPSCHGTGLIRSDDNLALSILRQIEEEGTRRRTREVLVKCPVGIANFLMNHKREHVAQIESRYGMSVRVEGDPMLISPDFSIEKFKTATRVVAEATAPVVSVDNSLMDQIDEDAAAEADEAEARELAAEAEAEASEAARGASDPAAGDTDSEERPKKRRRRRRRRSKNGNGENAENGGDNSSEEQRAEAAPTEDTDAPQTAESVEPEADAAAQTKADTLDETPKPKRTRRPRKKPEAAAEVPEDAEGQATPAAAEAPAEATPEVEAEKPKRRTRTRKPKAAAADAAPVETPEVAAEGEPAAEEKPKPKRRSRAKKKPEAVADATVDAPAAPAPEAVKAEAPKAEAPKAEATPEVADQATAKDETPAPVVPETVPEPAPIAEPAPAPVAEPAAVTTDTEAEEGTSKPKRKGWWSLGR*