ggKbase home page

BD02T64_scaffold_3600

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3600_1
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..476)
DNA (474bp) protein (158aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Neisseria sp. GT4A_CT1 RepID=G3Z674_9NEIS
Sel1 repeat protein {ECO:0000313|EMBL:EGC16481.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 3339
lidL; hypothetical protein
BD02T64_scaffold_3600_2
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

709..2775
DNA (2067bp) protein (689aa)
Polyphosphate kinase 1 {ECO:0000313|EMBL:AKH67709.1}; EC=2.7.4.1 {ECO:0000313|EMBL:AKH67709.1};; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae
Polyphosphate kinase n=1 Tax=gamma proteobacterium BDW918 RepID=I2JIU2_9GAMM
polyphosphate kinase
BD02T64_scaffold_3600_3
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2775..4271
DNA (1497bp) protein (499aa)
Exopolyphosphatase n=1 Tax=Marinobacter algicola DG893 RepID=A6EZV7_9ALTE
Exopolyphosphatase {ECO:0000313|EMBL:EDM47870.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algicola
exopolyphosphatase
BD02T64_scaffold_3600_4
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4380..4985
DNA (606bp) protein (202aa)
Phosphoglycerate/bisphosphoglycerate mutase n=1 Tax=gamma proteobacterium BDW918 RepID=I2JFL9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS08321.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
phosphoglycerate/bisphosphoglycerate mutase
BD02T64_scaffold_3600_5
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5028..5309
DNA (282bp) protein (94aa)
UPF0345 protein A11A3_11523 n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WA41_9GAMM rbh
UPF0345 protein A11A3_11523 {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1177179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcaniv
hypothetical protein
BD02T64_scaffold_3600_6
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5407..5703
DNA (297bp) protein (99aa)
Thiosulfate sulfurtransferase glpE n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LIP0_9GAMM rbh
Thiosulfate sulfurtransferase glpE {ECO:0000313|EMBL:EGG93246.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
glpE; thiosulfate sulfurtransferase
BD02T64_scaffold_3600_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5859..6647
DNA (789bp) protein (263aa)
Short chain dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2PG18_9RHIZ
short-chain dehydrogenase/reductase SDR Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
short chain dehydrogenase
BD02T64_scaffold_3600_8
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6732..7313
DNA (582bp) protein (194aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
alkylhydroperoxidase n=1 Tax=Ralstonia solanacearum RepID=UPI000312A624 rbh
alkylhydroperoxidase
BD02T64_scaffold_3600_9
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7402..7578
DNA (177bp) protein (59aa)
Acetyltransferase n=1 Tax=Shewanella oneidensis (strain MR-1) RepID=Q8EKL3_SHEON
Uncharacterized protein {ECO:0000313|EMBL:KDE41447.1}; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
acetyltransferase
BD02T64_scaffold_3600_10
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7607..8299)
DNA (693bp) protein (231aa)
Amidotransferase n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DV25_9GAMM
amidotransferase
Amidotransferase {ECO:0000313|EMBL:CCU73083.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-1.;"
BD02T64_scaffold_3600_11
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8459..11428
DNA (2970bp) protein (990aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel
RNA polymerase-associated protein RapA n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YE00_9GAMM
hepA; ATP-dependent helicase HepA
BD02T64_scaffold_3600_12
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11471..12244)
DNA (774bp) protein (258aa)
ferredoxin--NADP reductase n=1 Tax=Hahella ganghwensis RepID=UPI000379ACB4
flavodoxin reductase (ferredoxin-NADPH reductase) family protein 1
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 {ECO:0000313|EMBL:ABC31093.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella
BD02T64_scaffold_3600_13
Marinobacter sp. ES-1, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12350..13234
DNA (885bp) protein (295aa)
LysR family transcriptional regulator n=1 Tax=Marinobacter sp. ES-1 RepID=U7GE85_9ALTE
LysR family transcriptional regulator {ECO:0000313|EMBL:ERP95513.1}; TaxID=1396858 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Ma
DNA-binding transcriptional regulator
BD02T64_scaffold_3600_14
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13278..14099)
DNA (822bp) protein (274aa)
Metal dependent phosphoesterase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUL4_9GAMM
Histidinol phosphatase of the PHP family protein {ECO:0000313|EMBL:ETN93394.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
phosphotransferase domain-containing protein
BD02T64_scaffold_3600_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..15654
DNA (1392bp) protein (464aa)
ATP-dependent RNA helicase DbpA n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7ADF7_GEOSK rbh
dbpA; ATP-dependent RNA helicase DbpA
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:AAR33523.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter s
BD02T64_scaffold_3600_16
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..16237
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUL3_9GAMM rbh
SprT-like family protein {ECO:0000313|EMBL:ETN93393.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
metallopeptidase
BD02T64_scaffold_3600_17
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16315..16794
DNA (480bp) protein (160aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=434085 species="Bacteria; Proteobacteria; Gammapr
Peptidyl-prolyl cis-trans isomerase n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KEK3_9GAMM
peptidylprolyl isomerase, FKBP-type
BD02T64_scaffold_3600_18
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16855..17121
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000363AEF2 rbh
GIY-YIG nuclease superfamily protein {ECO:0000313|EMBL:ETN93392.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
excinuclease ABC subunit C
BD02T64_scaffold_3600_19
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17118..17429
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SE39_GALCS rbh
hypothetical protein Tax=GWA2_Gallionellales_54_124_curated
hypothetical protein
BD02T64_scaffold_3600_20
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17692..18468
DNA (777bp) protein (259aa)
flagellar motor protein PomA n=1 Tax=Psychromonas hadalis RepID=UPI0003B658F9
Flagellar motor protein PomA {ECO:0000313|EMBL:KGK41526.1}; TaxID=1545442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. A-D6.;"
flagellar motor protein PomA
BD02T64_scaffold_3600_21

Not on your lists

18502..19704
DNA (1203bp) protein (401aa)
OmpA/MotB domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BX50_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KKM83566.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
OmpA/MotB domain-containing protein
BD02T64_scaffold_3600_22
unknown

Not on your lists

19709..19963
DNA (255bp) protein (85aa)

This feature has no annotations

BD02T64_scaffold_3600_23
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19956..20291
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036B9F9C
Tax=BJP_IG2158_Methylococcales_50_91
BD02T64_scaffold_3600_24
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20410..21735
DNA (1326bp) protein (442aa)
ribosomal protein S12 methylthiotransferase n=1 Tax=Pseudomonas pelagia RepID=UPI00039FC98A rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
RNA modification enzyme, MiaB family protein
BD02T64_scaffold_3600_25
unknown

Not on your lists

22258..22749
DNA (492bp) protein (164aa)

This feature has no annotations

BD02T64_scaffold_3600_26
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23330..25186
DNA (1857bp) protein (619aa)
Hydantoinase/oxoprolinase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JAT7_FRASC rbh
hydantoinase/oxoprolinase
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:ETA00108.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
Displaying 26 items

View Taxonomy