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BD02T64_scaffold_3661

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3661_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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91..2925
DNA (2835bp) protein (945aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase (E1 subunit) n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YT51_9GAMM
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:KJS04039.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_3661_2
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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2980..3789
DNA (810bp) protein (270aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
2-oxoglutarate dehydrogenase E2 component (EC:2.3.1.61)
Dihydrolipoamide acetyltransferase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YT52_9GAMM
BD02T64_scaffold_3661_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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3743..4180
DNA (438bp) protein (146aa)
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Marinobacter algicola DG893 RepID=A6EWD8_9ALTE
Dihydrolipoamide succinyltransferase {ECO:0000313|EMBL:KJS04040.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_3661_4
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4214..5662
DNA (1449bp) protein (483aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobac
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Cellvibrio sp. BR RepID=I3ICJ5_9GAMM
BD02T64_scaffold_3661_5
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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5749..6915
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YD98_9GAMM rbh
BD02T64_scaffold_3661_6
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6915..7787
DNA (873bp) protein (291aa)
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alter
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21IW7_SACD2
BD02T64_scaffold_3661_7
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7873..8094)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y5V6_THIV6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL72374.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (st
BD02T64_scaffold_3661_8
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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8212..8838
DNA (627bp) protein (209aa)
DUTPase family protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KI94_SIMAS rbh
dUTPase family protein
DUTPase family protein {ECO:0000313|EMBL:AFU97930.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCR
BD02T64_scaffold_3661_9
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8980..9879
DNA (900bp) protein (300aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1397527 species="Bacteria; P
Malate dehydrogenase n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G5L8_9GAMM
mdh; malate dehydrogenase
BD02T64_scaffold_3661_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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9992..10471
DNA (480bp) protein (160aa)
thioredoxin-dependent thiol peroxidase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B60A
Peroxiredoxin {ECO:0000313|EMBL:KJS08162.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
bcp; bacterioferritin comigratory protein
BD02T64_scaffold_3661_11
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10541..10870
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI00036731DA
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KJS08163.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
preprotein translocase subunit YajC
BD02T64_scaffold_3661_12
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10999..12033
DNA (1035bp) protein (345aa)
Pyridoxal phosphate-dependent deaminase (EC:3.5.99.7)
D-cysteine desulfhydrase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDF3_9GAMM
Cysteine desulfhydrase {ECO:0000313|EMBL:KJS08178.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_3661_13
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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12109..13476
DNA (1368bp) protein (456aa)
Sodium:alanine symporter n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JQ71_9GAMM
Sodium:alanine symporter {ECO:0000313|EMBL:ESQ14445.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" sourc
sodium:alanine symporter family protein
BD02T64_scaffold_3661_14
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13534..14448
DNA (915bp) protein (305aa)
ushA; 5'-nucleotidase (EC:3.1.3.5)
5''''-nucleotidase n=1 Tax=Dasania marina RepID=UPI00037997D1
5'-nucleotidase {ECO:0000313|EMBL:KJS08164.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_3661_15
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14461..15249)
DNA (789bp) protein (263aa)
Membrane protein, putative n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTN2_9GAMM
Membrane protein {ECO:0000313|EMBL:KJS10009.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
protein of unknown function DUF81
BD02T64_scaffold_3661_16
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15362..16336
DNA (975bp) protein (325aa)
Transcriptional regulator CysB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTN1_9GAMM
CysB family transcriptional regulator {ECO:0000313|EMBL:KJS10008.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
LysR, substrate-binding
BD02T64_scaffold_3661_17
Pseudomonas sp. GM33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16537..17157
DNA (621bp) protein (207aa)
thrH; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase/homoserine phosphotransferase n=1 Tax=Pseudomonas sp. GM33 RepID=J3FWT8_9PSED
Phosphoserine phosphatase/homoserine phosphotransferase {ECO:0000313|EMBL:EJM46737.1}; TaxID=1144329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
BD02T64_scaffold_3661_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17219..17977
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000380E80E rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
BD02T64_scaffold_3661_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18067..19434)
DNA (1368bp) protein (456aa)
pabB; para-aminobenzoate synthase, component I (EC:4.1.3.-)
Para-aminobenzoate synthase component I n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTT5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS05259.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_3661_20

Not on your lists

19589..20077
DNA (489bp) protein (163aa)
ribonuclease n=1 Tax=Pseudomonas thermotolerans RepID=UPI000378952E
Uncharacterized protein {ECO:0000313|EMBL:KKL94667.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rraA; putative ribonuclease regulator RraA
BD02T64_scaffold_3661_21
Pseudomonas sp. 20_BN, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20081..21001)
DNA (921bp) protein (307aa)
Methyltransferase n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CLU7_PSEST
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:CDZ94250.1}; TaxID=1499686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
methyltransferase
BD02T64_scaffold_3661_22
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21048..21410)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21MZ2_SACD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD79937.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus
Displaying 22 items

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