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BD02T64_scaffold_3973

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3973_1
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..494
DNA (492bp) protein (164aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonad
tRNA-dihydrouridine synthase n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2G0L4_OCESG
tRNA-dihydrouridine synthase B
BD02T64_scaffold_3973_2
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

491..787
DNA (297bp) protein (99aa)
Transcriptional regulator, Fis family n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VZL8_MARMS
Fis family transcriptional regulator
DNA-binding protein Fis {ECO:0000256|SAAS:SAAS00276954}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strain MWYL1).;
BD02T64_scaffold_3973_3
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

834..2423
DNA (1590bp) protein (530aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10) rbh
Bifunctional purine biosynthesis protein PurH n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21ML1_SACD2 rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Al
BD02T64_scaffold_3973_4
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2471..2716)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2HJM1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD50016.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax paci
BD02T64_scaffold_3973_5
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2828..3955
DNA (1128bp) protein (376aa)
Oxidoreductase, FAD/FMN dependent n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KNU9_SIMAS
oxidoreductase, FAD/FMN dependent
Oxidoreductase, FAD/FMN dependent {ECO:0000313|EMBL:AFV00855.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM
BD02T64_scaffold_3973_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4214..5476
DNA (1263bp) protein (421aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
purD; Phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=3 Tax=Vibrio nigripulchritudo RepID=U4ESU9_9VIBR
BD02T64_scaffold_3973_7
Marinomonas sp. S3726, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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5524..6027
DNA (504bp) protein (168aa)
Glutamate-rich protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VNP8_9CYAN rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ13622.1}; TaxID=579484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. S3726.;"
conserved hypothetical protein
BD02T64_scaffold_3973_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6066..7550)
DNA (1485bp) protein (495aa)
ATPase n=1 Tax=Hahella ganghwensis RepID=UPI000373B926
ATPase {ECO:0000313|EMBL:KJS05908.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATPase AAA
BD02T64_scaffold_3973_9
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7691..8293
DNA (603bp) protein (201aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hyd
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255A73B
hypothetical protein
BD02T64_scaffold_3973_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8308..9288)
DNA (981bp) protein (327aa)
Transcriptional regulator, LysR family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVH2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS05906.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
LysR family transcriptional regulator
BD02T64_scaffold_3973_11
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9599..10033)
DNA (435bp) protein (145aa)
OsmC family protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JPK9_9GAMM
OsmC family protein {ECO:0000313|EMBL:EIF44911.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_3973_12
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10239..10871
DNA (633bp) protein (211aa)
transcriptional regulator n=1 Tax=Gilvimarinus chinensis RepID=UPI000363A821
cAMP-regulatory protein
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:ACR13635.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Ter
BD02T64_scaffold_3973_13
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10942..11934)
DNA (993bp) protein (331aa)
Cell division protein FtsA n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LHS8_9GAMM
Cell division protein FtsA {ECO:0000313|EMBL:EGG93551.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
PfkB
BD02T64_scaffold_3973_14
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12176..14407
DNA (2232bp) protein (744aa)
Penicillin-binding protein 1B n=2 Tax=Pseudomonas protegens RepID=Q4K603_PSEF5
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR00
penicillin-binding protein 1B
BD02T64_scaffold_3973_15
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14468..14989
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00036B3945 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS07900.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_3973_16
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15033..15722)
DNA (690bp) protein (230aa)
Putative ribosomal RNA small subunit methyltransferase C n=1 Tax=gamma proteobacterium BDW918 RepID=I2JGW0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS05206.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
putative ribosomal RNA small subunit methyltransferase C
BD02T64_scaffold_3973_17
unknown

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15805..16062
DNA (258bp) protein (86aa)

This feature has no annotations

BD02T64_scaffold_3973_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16090..17109)
DNA (1020bp) protein (340aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gam
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WGL1_9GAMM
BD02T64_scaffold_3973_19
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17218..17787)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035EB809
Uncharacterized protein {ECO:0000313|EMBL:KHF25263.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
hypothetical protein
BD02T64_scaffold_3973_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18078..19316
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUM5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF86594.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
acyl-CoA dehydrogenase
BD02T64_scaffold_3973_21
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19434..20807)
DNA (1374bp) protein (458aa)
Decarboxylase family protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KF25_9GAMM
Decarboxylase family protein {ECO:0000313|EMBL:EGG99032.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
decarboxylase-like protein
BD02T64_scaffold_3973_22
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20871..21440)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037A9A4E
Uncharacterized protein {ECO:0000313|EMBL:EIC20449.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp.
hypothetical protein
BD02T64_scaffold_3973_23

Not on your lists

comp(21819..23027)
DNA (1209bp) protein (403aa)
Alpha-methylacyl-CoA racemase n=1 Tax=uncultured bacterium F41-01 RepID=I3VIN9_9BACT
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:AFK79245.1}; TaxID=1191437 species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
L-carnitine dehydratase/bile acid-inducible protein F
BD02T64_scaffold_3973_24
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23264..23977)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Enterovibrio norvegicus RepID=UPI0003013D8D
luxR; transcriptional activator protein LuxR
Transcriptional activator protein LuxR {ECO:0000313|EMBL:CED59041.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella
BD02T64_scaffold_3973_25
unknown

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comp(24709..24978)
DNA (270bp) protein (90aa)

This feature has no annotations

BD02T64_scaffold_3973_26
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25291..26277
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003681782
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIG62245.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
HlyD family secretion protein
BD02T64_scaffold_3973_27
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26462..28621
DNA (2160bp) protein (720aa)
Toxin secretion ABC transporter ATP-binding subunit/permease n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KUE9_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZH75955.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina
putative COLICIN V SECRETION ABC TRANSPORTER
BD02T64_scaffold_3973_28
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28922..29872)
DNA (951bp) protein (317aa)
alpha-L-glutamate ligase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B993
Alpha-L-glutamate ligase {ECO:0000313|EMBL:KJS08154.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
alpha-L-glutamate ligase-like protein
BD02T64_scaffold_3973_29
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29903..31429)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B994
Uncharacterized protein {ECO:0000313|EMBL:KJS08155.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_3973_30
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31440..32075)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KHY5_SIMAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU98636.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BC
Displaying items 1-30 of 39 in total

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