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BD02T64_scaffold_2465

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2465_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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70..408
DNA (339bp) protein (113aa)
Regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase) n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS71_9GAMM
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KJS09463.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
Nitrogen regulatory protein P-II
BD02T64_scaffold_2465_2
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

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452..1720
DNA (1269bp) protein (423aa)
Ammonium transporter n=1 Tax=gamma proteobacterium BDW918 RepID=I2JF64_9GAMM rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
ammonium transporter
BD02T64_scaffold_2465_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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1832..2170
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G214_9GAMM
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:KJS09461.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
nitrogen regulatory protein P-II
BD02T64_scaffold_2465_4
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2210..3130)
DNA (921bp) protein (307aa)
Tyrosine recombinase XerC n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PEI6_CELJU
xerC; tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio ja
BD02T64_scaffold_2465_5
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3138..3878)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PEI7_CELJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE83023.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicu
BD02T64_scaffold_2465_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3875..4705)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=DAPF_CELJU
BD02T64_scaffold_2465_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4706..5962)
DNA (1257bp) protein (419aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
diaminopimelate decarboxylase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002D42A2C rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
BD02T64_scaffold_2465_8
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6221..7630)
DNA (1410bp) protein (470aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Gilvimarinus chinensis RepID=UPI00037C11AD
BD02T64_scaffold_2465_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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7881..8801
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BLH4_TERTT
Uncharacterized protein {ECO:0000313|EMBL:KJS09470.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_2465_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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8812..9549
DNA (738bp) protein (246aa)
Alginate biosynthesis regulatory protein AlgR n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KKI9_SIMAS
Chemotaxis protein CheY {ECO:0000313|EMBL:KJS09456.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
alginate biosynthesis regulatory protein AlgR
BD02T64_scaffold_2465_11
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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9768..10694
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9F0_9GAMM
BD02T64_scaffold_2465_12
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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10696..11523
DNA (828bp) protein (276aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CCK77876.1}; EC=4.2.1.75 {ECO:0000313|EMBL:CCK77876.1};; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispi
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YRN6_OLEAN
BD02T64_scaffold_2465_13
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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11595..12761
DNA (1167bp) protein (389aa)
Putative uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ETN93118.1}; EC=2.1.1.107 {ECO:0000313|EMBL:ETN93118.1};; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" so
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI000378B925
hypothetical protein
BD02T64_scaffold_2465_14
Pseudomonas sp. 20_BN, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12767..14023
DNA (1257bp) protein (419aa)
HemY protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CY16_PSEST
HemY protein {ECO:0000313|EMBL:CDZ95522.1}; TaxID=1499686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;"
HemY protein
BD02T64_scaffold_2465_15
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14134..15693)
DNA (1560bp) protein (520aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KNI8_SIMAS
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
BD02T64_scaffold_2465_16
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15808..16716)
DNA (909bp) protein (303aa)
33 kDa chaperonin n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KKW6_SIMAS
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1629722 species="Bacteria; Proteobacteria; Ga
heat shock protein HSP33
BD02T64_scaffold_2465_17
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16812..17210)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00036DE608 rbh
ribosome-associated heat shock protein 15
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" so
BD02T64_scaffold_2465_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17229..17966)
DNA (738bp) protein (246aa)
Probable hydrolase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS10_9GAMM
Haloacid dehalogenase {ECO:0000313|EMBL:KJS09248.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
HAD-superfamily hydrolase
Displaying 18 items

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