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BD02T64_scaffold_2633

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2633_1
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2994
DNA (2994bp) protein (998aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1411685 species="Bacteria; Proteobacteria; Ga
RNAse E (EC:3.1.4.-)
Ribonuclease E n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTQ8_9GAMM
BD02T64_scaffold_2633_2
unknown

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comp(2940..3134)
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_2633_3

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3398..4522
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ06428.1}; TaxID=455516 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
hypothetical protein
BD02T64_scaffold_2633_4
unknown

Not on your lists

comp(5129..5290)
DNA (162bp) protein (54aa)

This feature has no annotations

BD02T64_scaffold_2633_5
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5309..5815)
DNA (507bp) protein (169aa)
Putative membrane protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WGI5_9SPHN rbh
membrane protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
BD02T64_scaffold_2633_6
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5887..6462)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7T4_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
hypothetical protein
BD02T64_scaffold_2633_7
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6675..7565
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAH8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW33132.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_2633_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7633..8055
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAI0_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
BD02T64_scaffold_2633_9
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8082..8576
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7T7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW32191.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_2633_10

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comp(8786..9379)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7T5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKO12468.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_2633_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9397..10125)
DNA (729bp) protein (243aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=K1CJV6_PSEAI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
BD02T64_scaffold_2633_12
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10347..11138
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEM5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW30861.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
class II aldolase/adducin family protein
BD02T64_scaffold_2633_13
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11247..12983
DNA (1737bp) protein (579aa)
potassium transporter TrkA n=1 Tax=Psychromonas hadalis RepID=UPI0003B74791
TrkA-C domain-containing protein
Potassium transporter TrkA {ECO:0000313|EMBL:EWH05888.1}; TaxID=1452721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Ps
BD02T64_scaffold_2633_14
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13223..13945
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps
16S rRNA methyltransferase n=1 Tax=Microbulbifer agarilyticus RepID=UPI00025582CE
16S ribosomal RNA methyltransferase RsmE
BD02T64_scaffold_2633_15
unknown

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13991..14485
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036730C0 rbh
Uncharacterized protein {ECO:0000313|EMBL:CPR15762.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp.
hypothetical protein
BD02T64_scaffold_2633_16
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14620..15216
DNA (597bp) protein (199aa)
TetR family transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CDA04
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:EWS64586.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="
TetR family transcriptional regulator
BD02T64_scaffold_2633_17
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15278..16360
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364C190
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EIF32061.1}; Flags: Precursor;; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burk
BD02T64_scaffold_2633_18
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16507..19566
DNA (3060bp) protein (1020aa)
Acriflavin resistance protein n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FEF6_9PSED
Acriflavin resistance protein {ECO:0000313|EMBL:EPA95350.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
acriflavin resistance protein
BD02T64_scaffold_2633_19
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19657..21012
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003724A0B
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABM39467.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" sour
BD02T64_scaffold_2633_20
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21159..21515)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Photobacterium angustum (strain S14 / CCUG 15956) RepID=Q1ZUR6_PHOAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJR05409.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbuli
BD02T64_scaffold_2633_21
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21666..22493)
DNA (828bp) protein (276aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
uroporphyrinogen III synthase n=1 Tax=Pseudomonas pelagia RepID=UPI0003B3D4DF rbh
uroporphyrinogen III synthase HEM4
BD02T64_scaffold_2633_22
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22742..23854
DNA (1113bp) protein (371aa)
Amidohydrolase 2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU30_PARL1
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABS63413.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (st
BD02T64_scaffold_2633_23
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24064..24822
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JG68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIF41970.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_2633_24
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25032..28832
DNA (3801bp) protein (1267aa)
Signal transduction histidine kinase n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UX43_9GAMM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFT67131.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="C
BD02T64_scaffold_2633_25
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28863..32345
DNA (3483bp) protein (1161aa)
Signal transduction histidine kinase n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UX43_9GAMM
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFT67131.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="C
BD02T64_scaffold_2633_26
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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32424..32693
DNA (270bp) protein (90aa)
RNP-1 like RNA-binding protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A6R3_METMM rbh
RNP-1 like RNA-binding protein
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:AEG00534.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomon
BD02T64_scaffold_2633_27
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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32668..32961
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039B5A87 rbh
Transporter {ECO:0000313|EMBL:KJS04284.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_2633_28
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32981..34603)
DNA (1623bp) protein (541aa)
Uncharacterized FAD-dependent dehydrogenase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFZ9_9GAMM
Uncharacterized FAD-dependent dehydrogenase {ECO:0000313|EMBL:EAW30249.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobac
Uncharacterized FAD-dependent dehydrogenase
BD02T64_scaffold_2633_29

Not on your lists

comp(34686..34931)
DNA (246bp) protein (82aa)
membrane protein n=1 Tax=Pseudomonas pelagia RepID=UPI00039A8E54
Uncharacterized protein {ECO:0000313|EMBL:KKN42575.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 29 items

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