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BD02T64_scaffold_2654

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2654_1
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1370)
DNA (1368bp) protein (456aa)
ABC-1 domain-containing protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J142_9GAMM
ABC-1 domain-containing protein {ECO:0000313|EMBL:EGW20914.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylob
ABC transporter
BD02T64_scaffold_2654_2
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1454..2992)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037A729A
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAE52505.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source=
BD02T64_scaffold_2654_3
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2989..3528)
DNA (540bp) protein (180aa)
PAS sensor protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYA2_CELFA
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:AEE45891.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 201
BD02T64_scaffold_2654_4
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3983..5197
DNA (1215bp) protein (405aa)
Methyl-accepting chemotaxis protein, putative n=2 Tax=Aeromonas veronii RepID=F4DA20_AERVB
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ERF64884.1}; TaxID=1347420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas v
BD02T64_scaffold_2654_5
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5207..5575
DNA (369bp) protein (123aa)
chemotaxis protein CheY n=1 Tax=Pseudomonas extremaustralis RepID=UPI000288429C
Chemotaxis protein CheY {ECO:0000313|EMBL:EZI25021.1}; TaxID=1117958 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extre
chemotaxis protein CheY
BD02T64_scaffold_2654_6
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5624..5944
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:BAL26474.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
BD02T64_scaffold_2654_7
Aeromonas veronii, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6001..8298
DNA (2298bp) protein (766aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1073385 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aer
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00035F5EC5
chemotaxis protein CheA
BD02T64_scaffold_2654_8
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8416..11817
DNA (3402bp) protein (1134aa)
Methyl-accepting chemotaxis protein signaling domain protein n=2 Tax=Leptospira RepID=M6UJI1_9LEPT rbh
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EMO42956.1}; TaxID=1085540 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospi
mcp; chemotaxis protein rbh
BD02T64_scaffold_2654_9
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11827..12375
DNA (549bp) protein (183aa)
CheW protein; K03408 purine-binding chemotaxis protein CheW id=12494864 bin=THIO_HI species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
CheW protein
CheW protein {ECO:0000313|EMBL:ACT51944.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (
BD02T64_scaffold_2654_10
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12475..13278
DNA (804bp) protein (268aa)
MCP methyltransferase, CheR-type (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Chemotaxis protein methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220A1_RHOFD
BD02T64_scaffold_2654_11
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13289..13774
DNA (486bp) protein (162aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BIY6_TERTT
chemotaxis protein, stimulates methylation of MCP protein
BD02T64_scaffold_2654_12
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13805..14926
DNA (1122bp) protein (374aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1632857 species="Bacteria; Proteobacteria; Betap
UPI0003D59990 related cluster n=1 Tax=unknown RepID=UPI0003D59990
chemotaxis protein CheY
BD02T64_scaffold_2654_13
Shewanella frigidimarina, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14988..15365
DNA (378bp) protein (126aa)
Cyclic diguanosine monophosphate-binding protein n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q086F1_SHEFN
type IV pilus assembly PilZ
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIR
BD02T64_scaffold_2654_14
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15480..16298)
DNA (819bp) protein (273aa)
Sec-independent protein translocase protein TatC n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z8H1_9GAMM
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma p
twin-arginine protein translocation system subunit TatC
BD02T64_scaffold_2654_15
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16321..16779)
DNA (459bp) protein (153aa)
preprotein translocase subunit TatB n=1 Tax=Spongiibacter tropicus RepID=UPI0003B5A5EB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gamma
sec-independent protein translocase TatB
BD02T64_scaffold_2654_16
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16831..17097)
DNA (267bp) protein (89aa)
Sec-independent protein translocase protein TatA n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDQ1_9GAMM rbh
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
tatA; twin arginine-targeting protein translocase, TatA/E family
BD02T64_scaffold_2654_17
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17176..17508)
DNA (333bp) protein (111aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Cellvibrio sp. BR RepID=I3I6C7_9GAMM
phosphoribosyl-ATP pyrophosphatase
BD02T64_scaffold_2654_18
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17527..17934)
DNA (408bp) protein (136aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002EF62C9
BD02T64_scaffold_2654_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18001..18837)
DNA (837bp) protein (279aa)
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPP2_9GAMM
Ubiquinone biosynthesis protein UbiB {ECO:0000313|EMBL:KJS08693.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
Displaying 19 items

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