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BD02T64_scaffold_4375

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4375_1
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1091)
DNA (1089bp) protein (363aa)
Isocitrate lyase n=1 Tax=Shewanella benthica KT99 RepID=A9DHQ9_9GAMM
Isocitrate lyase {ECO:0000313|EMBL:EDP99177.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benthica KT99.;"
isocitrate lyase
BD02T64_scaffold_4375_2
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1547..3922
DNA (2376bp) protein (792aa)
S1 RNA binding domain protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PDW6_CELJU rbh
S1 RNA binding domain protein {ECO:0000313|EMBL:ACE84485.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio ja
S1 RNA binding domain-containing protein
BD02T64_scaffold_4375_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4041..4820
DNA (780bp) protein (260aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GZ79_9GAMM
NhaP-type Na+(K+)/H+ antiporter
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:AGA92053.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoc
BD02T64_scaffold_4375_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4768..5223
DNA (456bp) protein (152aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PAT6_DESSD
NhaP-type Na+(K+)/H+ antiporter
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:AGF78767.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulf
BD02T64_scaffold_4375_5

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5379..6587
DNA (1209bp) protein (403aa)
Alpha-methylacyl-CoA racemase n=1 Tax=uncultured bacterium F41-01 RepID=I3VIN9_9BACT rbh
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:AFK79245.1}; TaxID=1191437 species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
L-carnitine dehydratase/bile acid-inducible protein F
BD02T64_scaffold_4375_6
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6760..7920
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EW35_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK01137.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_4375_7
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8030..8482
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BV43_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20385.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
h16_A2414; hypothetical protein
BD02T64_scaffold_4375_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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8572..10098
DNA (1527bp) protein (509aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q470S8_CUPPJ rbh
Outer membrane protein {ECO:0000313|EMBL:GAN33021.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="C
RND efflux system, outer membrane lipoprotein, NodT
BD02T64_scaffold_4375_9
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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10149..11258
DNA (1110bp) protein (370aa)
Secretion protein HlyD family protein n=1 Tax=Aeromonas molluscorum 848 RepID=R1H9I1_9GAMM rbh
Multidrug resistance protein MdtN {ECO:0000313|EMBL:EXI76223.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp.
secretion protein HlyD family protein
BD02T64_scaffold_4375_10
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11248..12396
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AN23_PSERE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN50335.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
BD02T64_scaffold_4375_11
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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12709..13356
DNA (648bp) protein (216aa)
Inner membrane lipoprotein yiaD n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FHI0_9ALTE rbh
Membrane protein {ECO:0000313|EMBL:KJS08054.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
yiaD; inner membrane lipoprotein yiaD
BD02T64_scaffold_4375_12
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13407..14210
DNA (804bp) protein (268aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rR
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Cellvibrio sp. BR RepID=I3I7Y5_9GAMM
SAM-dependent methyltransferase
BD02T64_scaffold_4375_13
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14228..15124)
DNA (897bp) protein (299aa)
membrane protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3BB4C
membrane protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
hypothetical protein
BD02T64_scaffold_4375_14
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15171..16319)
DNA (1149bp) protein (383aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI000363D30C
BD02T64_scaffold_4375_15
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16434..17468)
DNA (1035bp) protein (345aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Dasania marina RepID=UPI000364048B rbh
tetrahydrodipicolinate succinylase, putative
BD02T64_scaffold_4375_16
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17500..17853)
DNA (354bp) protein (118aa)
Arsenate reductase n=1 Tax=gamma proteobacterium BDW918 RepID=I2JL07_9GAMM
Arsenate reductase {ECO:0000313|EMBL:EIF43659.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_4375_17
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18147..18800)
DNA (654bp) protein (218aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Endonuclease III n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTX7_9GAMM rbh
endonuclease III
BD02T64_scaffold_4375_18
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18800..20068)
DNA (1269bp) protein (423aa)
Succinyldiaminopimelate transaminase n=1 Tax=Cellvibrio sp. BR RepID=I3IA08_9GAMM
Succinyldiaminopimelate transaminase {ECO:0000313|EMBL:EIK44893.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellv
putative aminotransferase
BD02T64_scaffold_4375_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20110..22833)
DNA (2724bp) protein (908aa)
protein-P-II uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTX5_9GAMM
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
BD02T64_scaffold_4375_20
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22906..23676)
DNA (771bp) protein (257aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21HG8_SACD2
Displaying 20 items

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