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BD02T64_scaffold_4954

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4954_1
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84..1025)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Pseudomonas chlororaphis O6 RepID=I4XYT2_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:EUJ11161.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;
BD02T64_scaffold_4954_2
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1458..1694)
DNA (237bp) protein (79aa)
glutathione reductase (EC:1.8.1.7)
Glutathione reductase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LDS7_9GAMM
Glutathione reductase {ECO:0000313|EMBL:EGG94954.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
BD02T64_scaffold_4954_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1691..2773)
DNA (1083bp) protein (361aa)
Glutathione reductase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LDS7_9GAMM
Glutathione reductase {ECO:0000313|EMBL:KJS04028.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
glutathione reductase
BD02T64_scaffold_4954_4
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2786..4210)
DNA (1425bp) protein (475aa)
cysG; siroheme synthase (EC:4.99.1.4)
Siroheme synthase n=1 Tax=Pseudomonas putida CSV86 RepID=L1M2Q3_PSEPU
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida
BD02T64_scaffold_4954_5
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4297..5571)
DNA (1275bp) protein (425aa)
seryl-tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase n=1 Tax=Gilvimarinus chinensis RepID=UPI00037FA05D
BD02T64_scaffold_4954_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5629..6000)
DNA (372bp) protein (124aa)
Putative fluoride ion transporter CrcB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTK7_9GAMM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
crcB; CrcB protein
BD02T64_scaffold_4954_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6000..7328)
DNA (1329bp) protein (443aa)
Recombination factor protein RarA n=1 Tax=Cellvibrio sp. BR RepID=I3IC24_9GAMM
Recombination factor protein RarA {ECO:0000313|EMBL:KJS05775.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATPase, AAA family domain-containing protein
BD02T64_scaffold_4954_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7381..7836)
DNA (456bp) protein (152aa)
Periplasmic chaperone LolA n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTK5_9GAMM
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
membrane protein
BD02T64_scaffold_4954_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8072..10441)
DNA (2370bp) protein (790aa)
Cell division FtsK/SpoIIIE protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTK0_9GAMM rbh
Cell division protein FtsK {ECO:0000313|EMBL:KJS05776.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ftsK; DNA translocase ftsK
BD02T64_scaffold_4954_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10704..11552
DNA (849bp) protein (283aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria
thioredoxin reductase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B407C1
thioredoxin-disulfide reductase
BD02T64_scaffold_4954_11
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11588..12310
DNA (723bp) protein (241aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ8_9GAMM
aat; leucyl/phenylalanyl-tRNA--protein transferase
BD02T64_scaffold_4954_12
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12437..13156
DNA (720bp) protein (240aa)
Arginyltransferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ7_9GAMM
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
BD02T64_scaffold_4954_13
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13300..13824
DNA (525bp) protein (175aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicom
ferroxidase (EC:1.16.3.1)
Ferroxidase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCM5_HALP7
BD02T64_scaffold_4954_14

Not on your lists

13983..14207
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=1 Tax=Bermanella marisrubri RepID=Q1N4M9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKL55912.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
infA; translation initiation factor IF-1
BD02T64_scaffold_4954_15
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14332..16605)
DNA (2274bp) protein (758aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00036A2D0F
Clp protease ClpX {ECO:0000313|EMBL:KJS05781.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATP-dependent Clp protease ATP-binding subunit ClpA
BD02T64_scaffold_4954_16
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16618..16998)
DNA (381bp) protein (127aa)
Sua5/YciO/YrdC/YwlC n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KGE5_9GAMM
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
ATP-dependent Clp protease adaptor protein ClpS
BD02T64_scaffold_4954_17
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17271..17555
DNA (285bp) protein (95aa)
DNA-binding protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B783
cold-shock DNA-binding protein family protein
Cold-shock DNA-binding protein family protein {ECO:0000313|EMBL:AFU97838.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM
BD02T64_scaffold_4954_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17790..18407
DNA (618bp) protein (206aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteri
Ribosomal large subunit pseudouridine synthase E n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DDD2_9ALTE rbh
pseudouridine synthase
BD02T64_scaffold_4954_19

Not on your lists

18442..18888
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJ36_NEPCE
Uncharacterized protein {ECO:0000313|EMBL:KKL76916.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NUDIX hydrolase
BD02T64_scaffold_4954_20

Not on your lists

18933..20057
DNA (1125bp) protein (375aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PKX7_CELJU
Uncharacterized protein {ECO:0000313|EMBL:KKL76915.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_4954_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20054..20698
DNA (645bp) protein (215aa)
High frequency lysogenization protein HflD homolog n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=HFLD_SACD2 rbh
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_
protein of unknown function DUF489
BD02T64_scaffold_4954_22
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20813..22081
DNA (1269bp) protein (423aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PKX9_CELJU
Displaying 22 items

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