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BD02T64_scaffold_4980

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4980_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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74..676
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEJ4_9GAMM
ruvA; ATP-dependent DNA helicase RuvA
BD02T64_scaffold_4980_2
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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731..1747
DNA (1017bp) protein (339aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteri
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KS65_9GAMM
Holliday junction DNA helicase RuvB
BD02T64_scaffold_4980_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1744..2148
DNA (405bp) protein (135aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G563_9GAMM rbh
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KJS08676.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_4980_4
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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2179..2868
DNA (690bp) protein (230aa)
protein tolQ n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00036555FA
Protein tolQ {ECO:0000313|EMBL:KJS08677.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
tolQ; protein TolQ
BD02T64_scaffold_4980_5
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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2962..3282
DNA (321bp) protein (107aa)
Biopolymer transport protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=I3WB82_SIMAS
tolR; biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AFV00950.1}; Biopolymer transport protein TolR {ECO:0000313|EMBL:AFK93836.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simid
BD02T64_scaffold_4980_6
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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3283..4140
DNA (858bp) protein (286aa)
Protein TolA n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=H8YHZ4_SIMAS
tolA; protein TolA
Protein TolA {ECO:0000313|EMBL:AFV00951.1}; TolA {ECO:0000313|EMBL:AFD30844.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain D
BD02T64_scaffold_4980_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4183..5466
DNA (1284bp) protein (428aa)
Protein TolB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQ55_9GAMM rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
tolB; translocation protein TolB
BD02T64_scaffold_4980_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5524..6042
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000361E060
Uncharacterized protein {ECO:0000313|EMBL:KJS08681.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
peptidoglycan-associated lipoprotein
BD02T64_scaffold_4980_9
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6130..6903
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI0003744F28 rbh
hypothetical protein
Tetratricopeptide protein {ECO:0000313|EMBL:ACR11419.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;"
BD02T64_scaffold_4980_10
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7060..7710
DNA (651bp) protein (217aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2JAZ5_9PSED
radical SAM domain-containing protein
BD02T64_scaffold_4980_11
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7776..8453
DNA (678bp) protein (226aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Cellvibrio sp. BR RepID=I3I7Z8_9GAMM rbh
putative transcriptional regulator
BD02T64_scaffold_4980_12
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8938..9423)
DNA (486bp) protein (162aa)
PAS sensor protein n=1 Tax=Pseudomonas mendocina EGD-AQ5 RepID=U1T378_PSEME
PAS sensor protein {ECO:0000313|EMBL:ERH52941.1}; TaxID=1390370 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
transcriptional regulator
BD02T64_scaffold_4980_13

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comp(9570..12713)
DNA (3144bp) protein (1048aa)
cation transporter n=1 Tax=Dasania marina RepID=UPI00035D53EB
Uncharacterized protein {ECO:0000313|EMBL:KKO12662.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative silver efflux pump
BD02T64_scaffold_4980_14

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comp(12738..14003)
DNA (1266bp) protein (422aa)
Secretion protein HlyD n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZE62_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKO12663.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
secretion protein HlyD
BD02T64_scaffold_4980_15

Not on your lists

comp(14012..15355)
DNA (1344bp) protein (448aa)
Outer membrane efflux protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JJ71_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKO09112.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Outer membrane efflux protein
BD02T64_scaffold_4980_16
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15999..16289)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI0003806BEB rbh
Plasmid stabilization protein {ECO:0000313|EMBL:KFI20542.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oc
plasmid stabilization system protein
BD02T64_scaffold_4980_17
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16279..16521)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00035D078E rbh
helix-turn-helix protein, CopG
Helix-turn-helix protein, CopG {ECO:0000313|EMBL:ABA56969.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus o
BD02T64_scaffold_4980_18
unknown

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comp(16867..17034)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 18 items

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