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BD02T64_scaffold_1213

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1213_1
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..920)
DNA (918bp) protein (306aa)
pepP; aminopeptidase P II (EC:3.4.11.9)
Aminopeptidase P II n=1 Tax=Cellvibrio sp. BR RepID=I3IDH4_9GAMM
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:KJS06046.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1213_2
unknown

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1143..1346
DNA (204bp) protein (68aa)

This feature has no annotations

BD02T64_scaffold_1213_3
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1428..2006)
DNA (579bp) protein (193aa)
Putative conserved exported protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LI02_9GAMM
Putative conserved exported protein {ECO:0000313|EMBL:EGG93482.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
YecA family protein
BD02T64_scaffold_1213_4

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2227..2436
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U912_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL56283.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1213_5
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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2457..2762
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000381CF78
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ZapA domain containing protein
BD02T64_scaffold_1213_6
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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3034..3636
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-
5-formyltetrahydrofolate cyclo-ligase family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9S2_9GAMM rbh
5-formyltetrahydrofolate cyclo-ligase
BD02T64_scaffold_1213_7
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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3671..5083
DNA (1413bp) protein (471aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacte
Pyruvate kinase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVJ3_9GAMM
pyruvate kinase
BD02T64_scaffold_1213_8
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5101..6708)
DNA (1608bp) protein (536aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=314287 species="Bacteria; Proteobacter
ilvA; threonine ammonia-lyase, biosynthetic (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YVJ2_9GAMM
BD02T64_scaffold_1213_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6787..7482
DNA (696bp) protein (232aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
ribose 5-phosphate isomerase n=1 Tax=Microbulbifer agarilyticus RepID=UPI00025586ED
BD02T64_scaffold_1213_10
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

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7520..8200
DNA (681bp) protein (227aa)
P-nitrobenzoate reductase NfnB n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QQG8_RALPI
NADH dehydrogenase {ECO:0000313|EMBL:KIF12826.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
P-nitrobenzoate reductase NfnB
BD02T64_scaffold_1213_11
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8280..9137
DNA (858bp) protein (286aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1215092 species="B
formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z9Y3_PSEAC
BD02T64_scaffold_1213_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9358..10371
DNA (1014bp) protein (338aa)
trxB; thioredoxin reductase (EC:1.8.1.9)
Ferredoxin--NADP reductase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NY75_AZOS1
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685, ECO:0000313|EMBL:KJB96092.1}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};;
BD02T64_scaffold_1213_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10436..10750
DNA (315bp) protein (105aa)
Ferredoxin n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B3W6_9RHIZ
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGK57683.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1N
BD02T64_scaffold_1213_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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11004..11438
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036D3CE0 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETW99933.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
BD02T64_scaffold_1213_15
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11667..12692)
DNA (1026bp) protein (342aa)
YihE protein2C required for LPS synthesis n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KD66_9GAMM
YihE protein2C required for LPS synthesis {ECO:0000313|EMBL:EGG99689.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
serine/threonine protein kinase
BD02T64_scaffold_1213_16
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12726..13796)
DNA (1071bp) protein (357aa)
Cysteine synthase {ECO:0000313|EMBL:KEA64979.1}; EC=2.5.1.47 {ECO:0000313|EMBL:KEA64979.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Ma
cysK; cysteine synthase A (EC:2.5.1.47)
cysteine synthase n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037D147C
BD02T64_scaffold_1213_17
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13852..14958)
DNA (1107bp) protein (369aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG grou
frmA; S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.1 1.1.1.284)
S-(Hydroxymethyl)glutathione dehydrogenase n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L3E4_9GAMM
BD02T64_scaffold_1213_18
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15385..16479
DNA (1095bp) protein (365aa)
Glu/Leu/Phe/Val dehydrogenase; K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
Glu/Leu/Phe/Val dehydrogenase, dimerization region n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XXD5_PSEMY
Glu/Leu/Phe/Val dehydrogenase
BD02T64_scaffold_1213_19
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

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16504..17604
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036A2990
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:EKE77947.1}; TaxID=745411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis
bkdA1; branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit
BD02T64_scaffold_1213_20
Marinobacter sp. AK21, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17582..18673
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. ES-1 RepID=U7GCV9_9ALTE
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit {ECO:0000313|EMBL:KEF31005.1}; TaxID=1137280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromon
transketolase
BD02T64_scaffold_1213_21
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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18724..19833
DNA (1110bp) protein (370aa)
Dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EAR60412.1}; EC=2.3.1.61 {ECO:0000313|EMBL:EAR60412.1};; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Ne
Dihydrolipoamide acetyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIW2_NEPCE
dihydrolipoamide acetyltransferase
BD02T64_scaffold_1213_22
Vibrio brasiliensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19867..21192)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00036B4CC2 rbh
Omega amino acid--pyruvate transaminase {ECO:0000313|EMBL:EGA64476.1}; TaxID=945543 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio brasilie
bauA; beta-alanine--pyruvate transaminase
BD02T64_scaffold_1213_23
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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21394..23187
DNA (1794bp) protein (598aa)
Thiamine pyrophosphate protein TPP binding domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z5_NITHN
thiamine pyrophosphate TPP binding domain-containing protein
Thiamine pyrophosphate protein TPP binding domain protein {ECO:0000313|EMBL:ADE14552.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus
BD02T64_scaffold_1213_24

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23184..24011
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JBM8_NITOC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL20891.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1213_25
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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24004..24831
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K5B4_NITWC
Citrate synthase {ECO:0000313|EMBL:ETN91583.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
hypothetical protein
BD02T64_scaffold_1213_26
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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24835..26946
DNA (2112bp) protein (704aa)
TonB-dependent receptor n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Z8_NITHN
Outer membrane cobalamin translocator {ECO:0000313|EMBL:ETN91584.1}; Flags: Precursor;; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MO
TonB-dependent receptor
BD02T64_scaffold_1213_27
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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26977..27921
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C100_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KJS04133.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_1213_28
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27934..32451
DNA (4518bp) protein (1506aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bact
Diguanylate cyclase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C101_NITHN
diguanylate cyclase
BD02T64_scaffold_1213_29
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32506..34308)
DNA (1803bp) protein (601aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QGY6_SHELP
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ABO24734.1}; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewane
BD02T64_scaffold_1213_30
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34395..35966)
DNA (1572bp) protein (524aa)
long-chain fatty acid--CoA ligase n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI00036520E0
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EAS47745.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207
AMP-dependent synthetase and ligase
Displaying items 1-30 of 59 in total

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