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BD02T64_scaffold_1584

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1584_1
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1128
DNA (1128bp) protein (376aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Glaciecola sp. (strain 4H-3-7+YE-5) RepID=F4AUU5_GLAS4
Cation transporter {ECO:0000313|EMBL:KJE48243.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;
CzcA family heavy metal efflux pump
BD02T64_scaffold_1584_2

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1200..1541
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PL87_CELJU
Uncharacterized protein {ECO:0000313|EMBL:KKL83180.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1584_3

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1538..2596
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LIU5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL83179.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1584_4
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2593..3276
DNA (684bp) protein (228aa)
Type 12 methyltransferase n=1 Tax=Pseudomonas putida CSV86 RepID=L1M3K0_PSEPU
Type 12 methyltransferase {ECO:0000313|EMBL:EKX85579.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas put
hypothetical protein
BD02T64_scaffold_1584_5
unknown

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comp(3450..3671)
DNA (222bp) protein (74aa)

This feature has no annotations

BD02T64_scaffold_1584_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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3888..5267
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KHW3_SIMAS
Uncharacterized protein {ECO:0000313|EMBL:KJS04209.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_1584_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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5638..6975
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
tig; trigger factor (EC:5.2.1.8)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036EA028 rbh
BD02T64_scaffold_1584_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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7113..7742
DNA (630bp) protein (210aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPH4_9GAMM
BD02T64_scaffold_1584_9
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7831..9120
DNA (1290bp) protein (430aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=CLPX_SACD2
ATP-dependent Clp protease, ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharop
BD02T64_scaffold_1584_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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9237..11672
DNA (2436bp) protein (812aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21KA7_SACD2 rbh
Lon-A peptidase. Serine peptidase. MEROPS family S16
BD02T64_scaffold_1584_11
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

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11781..12056
DNA (276bp) protein (92aa)
DNA-binding protein HU-beta n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L155_9GAMM
DNA-binding protein HU-beta {ECO:0000313|EMBL:EGG30000.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
histone family protein DNA-binding protein
BD02T64_scaffold_1584_12
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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12211..14004
DNA (1794bp) protein (598aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacter
Peptidyl-prolyl cis-trans isomerase D n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSZ4_9GAMM
putative peptidyl-prolyl cis-trans isomerase D
BD02T64_scaffold_1584_13
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14169..15701)
DNA (1533bp) protein (511aa)
Lytic transglycosylase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KUD1_SIMAS
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AFU97572.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCR
BD02T64_scaffold_1584_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15820..16602)
DNA (783bp) protein (261aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
Hydroxyacylglutathione hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK75_9PROT
BD02T64_scaffold_1584_15
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16687..17487
DNA (801bp) protein (267aa)
Generic methyl-transferase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHP9_CELJU rbh
methyl-transferase
Generic methyl-transferase {ECO:0000313|EMBL:ACE84663.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japon
BD02T64_scaffold_1584_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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17484..17927
DNA (444bp) protein (148aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
RNaseH ribonuclease n=1 Tax=Gilvimarinus chinensis RepID=UPI00036F53B2
Ribonuclease H
BD02T64_scaffold_1584_17
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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17924..18637
DNA (714bp) protein (238aa)
DNA polymerase III, epsilon subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSZ8_9GAMM
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EAS47689.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207
DNA polymerase III subunit epsilon
BD02T64_scaffold_1584_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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18932..20587
DNA (1656bp) protein (552aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LGL7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS04217.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_1584_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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20798..21853
DNA (1056bp) protein (352aa)
putative periplasmic protease (EC:3.4.21.-) rbh
Possible protease SohB n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHP3_CELJU rbh
Peptidase {ECO:0000313|EMBL:KJS04218.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1584_20
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21883..23049)
DNA (1167bp) protein (389aa)
sodium:hydrogen antiporter n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00036CA1BA
Sodium/hydrogen antiporter {ECO:0000313|EMBL:EAS47563.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
sodium/hydrogen antiporter
BD02T64_scaffold_1584_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23126..23635)
DNA (510bp) protein (170aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SJ36_HAHCH
Oxidoreductase {ECO:0000313|EMBL:KJS04219.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_1584_22
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23619..25283)
DNA (1665bp) protein (555aa)
Sulfite reductase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KFE8_SIMAS
sulfite reductase
Sulfite reductase {ECO:0000313|EMBL:AFU97646.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 175
BD02T64_scaffold_1584_23
unknown

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25585..25698
DNA (114bp) protein (38aa)

This feature has no annotations

BD02T64_scaffold_1584_24
Shewanella pealeana, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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25949..27127
DNA (1179bp) protein (393aa)
ABC transporter permease n=1 Tax=Psychromonas hadalis RepID=UPI0003B5774A
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABV86248.1}; TaxID=398579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanell
BD02T64_scaffold_1584_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27307..28104)
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZZ1_POLSJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE47151.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
BD02T64_scaffold_1584_26
bacterium YEK0313, Bacteria

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comp(28150..28932)
DNA (783bp) protein (261aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1522316 spec
Naphthoate synthase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4H2_POLGS
menB; Naphthoate synthase
BD02T64_scaffold_1584_27
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29115..29894)
DNA (780bp) protein (260aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl CoA hydratase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZM2_9RHOB
Enoyl CoA hydratase {ECO:0000313|EMBL:EAQ02503.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (s
BD02T64_scaffold_1584_28
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29955..31100)
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DA34_9ALTE rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMP54512.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sant
acyl-CoA dehydrogenase
BD02T64_scaffold_1584_29
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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31292..31750
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000309FE7A
MarR family transcriptional regulator {ECO:0000313|EMBL:BAP79309.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
regulatory helix-turn-helix protein, MarR family protein 22
BD02T64_scaffold_1584_30
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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31846..32313
DNA (468bp) protein (156aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM6
CRISPR-associated protein Csn1 n=1 Tax=Spongiibacter tropicus RepID=UPI0003B55083
CRISPR-associated protein Csn1
Displaying items 1-30 of 36 in total

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