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BD02T64_scaffold_1951

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1951_1
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2043
DNA (2043bp) protein (681aa)
Formate dehydrogenase, alpha subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRA7_9GAMM
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EAS46701.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC220
formate dehydrogenase
BD02T64_scaffold_1951_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2018..2857
DNA (840bp) protein (280aa)
Protein FdhD homolog n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AID6_COLFT rbh
fdhD; formate dehydrogenase chain D
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
BD02T64_scaffold_1951_3
Xanthobacter flavus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2900..3118
DNA (219bp) protein (73aa)
HtxW n=1 Tax=Xanthobacter flavus RepID=A5X3H6_XANFL rbh
hypothetical protein
HtxW {ECO:0000313|EMBL:ABG02417.1}; TaxID=281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter flavus.;"
BD02T64_scaffold_1951_4
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..4996)
DNA (1788bp) protein (596aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KR89_9BURK
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
BD02T64_scaffold_1951_5
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5257..5697)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS33118.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
BD02T64_scaffold_1951_6
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5790..9566)
DNA (3777bp) protein (1259aa)
Signal transduction histidine kinase n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C5Z8_CYCSP
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFT67131.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="C
BD02T64_scaffold_1951_7
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9806..11182)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Glaciecola RepID=F4ATG5_GLAS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE24498.1}; TaxID=983545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola sp. (str
BD02T64_scaffold_1951_8
uncultured Chromatiales bacterium HF0200_41F04, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11199..13562)
DNA (2364bp) protein (788aa)
Putative uncharacterized protein n=1 Tax=uncultured Chromatiales bacterium HF0200_41F04 RepID=E0XV08_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18249.1}; TaxID=710740 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; environmental samples.;" source="uncultured Chromatia
BD02T64_scaffold_1951_9
uncultured Chromatiales bacterium HF0200_41F04, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13562..14674)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=uncultured Chromatiales bacterium HF0200_41F04 RepID=E0XV09_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18250.1}; TaxID=710740 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; environmental samples.;" source="uncultured Chromatia
hypothetical protein
BD02T64_scaffold_1951_10

Not on your lists

comp(14674..15087)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036AB2FA
Uncharacterized protein {ECO:0000313|EMBL:KKO08294.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
biopolymer transport protein ExbD/TolR
BD02T64_scaffold_1951_11
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15090..15491)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HT97_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS12887.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
biopolymer transport protein ExbD/TolR
BD02T64_scaffold_1951_12
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15518..16141)
DNA (624bp) protein (208aa)
flagellar motor protein MotA n=1 Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI00037027D6
Uncharacterized protein {ECO:0000313|EMBL:ESQ11367.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
MotA/TolQ/ExbB proton channel
BD02T64_scaffold_1951_13
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16284..16754)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036012EA rbh
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EGW23649.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;
glutathione-dependent formaldehyde-activating protein
BD02T64_scaffold_1951_14
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16761..17024)
DNA (264bp) protein (88aa)
toxin of toxin-antitoxin (TA) system n=1 Tax=Methylobacter marinus RepID=UPI000378D819 rbh
Addiction module antitoxin {ECO:0000313|EMBL:EIF42053.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
toxin of toxin-antitoxin system
BD02T64_scaffold_1951_15
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17021..17263)
DNA (243bp) protein (81aa)
Prevent-host-death family protein n=2 Tax=Cycloclasticus RepID=K0C2Q4_CYCSP rbh
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AFT67629.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycl
BD02T64_scaffold_1951_16
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17494..17826)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PKQ5_CELJU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE83820.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicu
BD02T64_scaffold_1951_17
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18022..18897)
DNA (876bp) protein (292aa)
LysR, substrate-binding n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21DJ7_SACD2
LysR, substrate-binding
LysR, substrate-binding {ECO:0000313|EMBL:ABD83232.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus
BD02T64_scaffold_1951_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19307..20440)
DNA (1134bp) protein (378aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10 1.3.8.1)
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB84226.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB84226.1};; EC=1.3.99.10 {ECO:0000313|EMBL:AEB84226.1};; TaxID=596154 species="Bac
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6B7_ALIDK
BD02T64_scaffold_1951_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20522..21670)
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HZY5_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN77101.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rub
acyl-CoA dehydrogenase-like protein
BD02T64_scaffold_1951_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21802..22824)
DNA (1023bp) protein (341aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10 1.3.8.1)
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB84226.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB84226.1};; EC=1.3.99.10 {ECO:0000313|EMBL:AEB84226.1};; TaxID=596154 species="Bac
Isovaleryl-CoA dehydrogenase, Butyryl-CoA dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6B7_ALIDK
BD02T64_scaffold_1951_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22921..23328)
DNA (408bp) protein (136aa)
Ferric uptake regulation protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQK6_9GAMM rbh
Fur family transcriptional regulator {ECO:0000313|EMBL:KJS09963.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ferric-uptake regulator
BD02T64_scaffold_1951_22
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23399..23842
DNA (444bp) protein (148aa)
Outer membrane lipoprotein OmlA n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQK7_9GAMM rbh
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria ba
outer membrane lipoprotein omlA
BD02T64_scaffold_1951_23
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23891..24250)
DNA (360bp) protein (120aa)
UPF0125 protein Sde_2738 n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21H31_SACD2
UPF0125 protein U062_01794 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
protein of unknown function UPF0125
BD02T64_scaffold_1951_24
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24311..24760)
DNA (450bp) protein (150aa)
Oligoketide cyclase/lipid transport protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5S1_9GAMM
Toxin RatA {ECO:0000313|EMBL:ETN92008.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
cyclase/dehydrase
BD02T64_scaffold_1951_25
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24771..26102)
DNA (1332bp) protein (444aa)
Transporter n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQL0_9GAMM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
transporter sodium-dependent family
BD02T64_scaffold_1951_26
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26387..26758
DNA (372bp) protein (124aa)
SsrA-binding protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQL1_9GAMM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma prot
SsrA-binding protein
Displaying 26 items

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