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BD02T64_scaffold_172

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Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_172_1

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2..283
DNA (282bp) protein (94aa)
transposase IS110 n=1 Tax=Psychromonas ossibalaenae RepID=UPI00036174C1
Uncharacterized protein {ECO:0000313|EMBL:KKK65064.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS116/IS110/IS902 family protein
BD02T64_scaffold_172_2
unknown

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1262..1954
DNA (693bp) protein (231aa)

This feature has no annotations

BD02T64_scaffold_172_3
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2045..2407)
DNA (363bp) protein (121aa)
transposase n=1 Tax=Psychromonas hadalis RepID=UPI0003B36A46
Transposase {ECO:0000313|EMBL:CEE91847.1}; TaxID=1437825 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila s
hypothetical protein
BD02T64_scaffold_172_4
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2368..2937)
DNA (570bp) protein (190aa)
transposase n=1 Tax=Psychromonas hadalis RepID=UPI0003B36A46 rbh
Transposase {ECO:0000313|EMBL:CCW32923.1}; TaxID=1306162 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila F
hypothetical protein
BD02T64_scaffold_172_5
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3910..4266)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q082T8_SHEFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWH09155.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum agari
BD02T64_scaffold_172_6
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4266..4736)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q082T8_SHEFN
Uncharacterized protein {ECO:0000313|EMBL:EWH09155.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum agari
hypothetical protein
BD02T64_scaffold_172_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4799..5488)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZN0_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ86600.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_172_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6234..7043)
DNA (810bp) protein (270aa)
GntR family transcriptional regulator n=1 Tax=Leucothrix mucor RepID=UPI0003B39C2B rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB11383.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo
putative transcriptional regulator, GntR Family
BD02T64_scaffold_172_9
Paraglaciecola agarilytica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7775..10735
DNA (2961bp) protein (987aa)
TonB-dependent receptor n=1 Tax=Glaciecola agarilytica NO2 RepID=K6XFG6_9ALTE rbh
TonB-dependent receptor {ECO:0000313|EMBL:GAC03138.1}; TaxID=1125747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
TonB-dependent receptor rbh
BD02T64_scaffold_172_10
Paraglaciecola agarilytica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10945..13185
DNA (2241bp) protein (747aa)
Poly(Beta-D-mannuronate) lyase {ECO:0000313|EMBL:GAC03140.1}; EC=4.2.2.3 {ECO:0000313|EMBL:GAC03140.1};; TaxID=1125747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromo
Poly(Beta-D-mannuronate) lyase n=1 Tax=Glaciecola agarilytica NO2 RepID=K6XW70_9ALTE rbh
poly(beta-D-mannuronate) lyase rbh
BD02T64_scaffold_172_11
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13348..14112
DNA (765bp) protein (255aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X8I4_CELAD rbh
Oxidoreductase {ECO:0000313|EMBL:ETX11361.1}; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis DSM 15871.;"
BD02T64_scaffold_172_12
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14190..14624
DNA (435bp) protein (145aa)
L-fucose mutarotase {ECO:0000256|SAAS:SAAS00148242}; EC=5.1.3.29 {ECO:0000256|SAAS:SAAS00148242};; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadace
L-fucose mutarotase n=1 Tax=Glaciecola polaris LMG 21857 RepID=K7AJ06_9ALTE rbh
transporter
BD02T64_scaffold_172_13
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14750..15964
DNA (1215bp) protein (405aa)
Natural resistance-associated macrophage protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6YR62_9ALTE rbh
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:GAC35214.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.
natural resistance-associated macrophage protein rbh
BD02T64_scaffold_172_14
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15982..16497
DNA (516bp) protein (172aa)
Gluconokinase {ECO:0000313|EMBL:GAC35213.1}; EC=2.7.1.12 {ECO:0000313|EMBL:GAC35213.1};; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paragl
thermoresistant glucokinase family carbohydrate kinase (EC:2.7.1.12)
Gluconokinase n=1 Tax=Glaciecola polaris LMG 21857 RepID=K7A2S4_9ALTE rbh
BD02T64_scaffold_172_15
Paraglaciecola agarilytica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16590..17675
DNA (1086bp) protein (362aa)
Alginate lyase n=1 Tax=Glaciecola agarilytica NO2 RepID=K6XW76_9ALTE rbh
Alginate lyase {ECO:0000313|EMBL:GAC03145.1}; TaxID=1125747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola agarilyt
alginate lyase 2 rbh
BD02T64_scaffold_172_16
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17979..18737
DNA (759bp) protein (253aa)
Integrase catalytic region n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZV9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89811.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_172_17
unknown

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comp(18913..19008)
DNA (96bp) protein (32aa)

This feature has no annotations

BD02T64_scaffold_172_18
Shewanella frigidimarina, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19031..19909)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q082T8_SHEFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI71727.1}; Flags: Precursor;; TaxID=318167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_172_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19964..20422)
DNA (459bp) protein (153aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
mgsA; methylglyoxal synthase (EC:4.2.3.3)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI0003740B0C
BD02T64_scaffold_172_20
Pseudoalteromonas haloplanktis, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20470..21549)
DNA (1080bp) protein (360aa)
fbaA; fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:CAI86168.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CAI86168.1};; TaxID=326442 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales
hypothetical protein n=1 Tax=Gayadomonas joobiniege RepID=UPI000380F42B
BD02T64_scaffold_172_21
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21551..22174)
DNA (624bp) protein (208aa)
Keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:KHD12147.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KHD12147.1};; EC=4.1.3.16 {ECO:0000313|EMBL:KHD12147.1};; TaxID=1003181 species="Bacteria; Proteobacte
4-hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Pseudoalteromonas sp. BSi20652 RepID=G7EIU8_9GAMM rbh
BD02T64_scaffold_172_22
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22265..23206)
DNA (942bp) protein (314aa)
2-keto-3-deoxygluconate kinase n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q07YH0_SHEFN rbh
Ketodeoxygluconokinase {ECO:0000313|EMBL:KHD12146.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarga
ribokinase-like domain-containing protein rbh
BD02T64_scaffold_172_23
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23211..24551)
DNA (1341bp) protein (447aa)
MFS transporter, ACS family, hexuronate transporter n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZGP7_9ALTE rbh
MFS transporter {ECO:0000313|EMBL:KHD12145.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita ne
major facilitator superfamily transporter
BD02T64_scaffold_172_24
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24551..24949)
DNA (399bp) protein (133aa)
Pectin degradation protein kdgF n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XLB6_9ALTE
Pectin degradation protein kdgF {ECO:0000313|EMBL:GAC21444.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paragla
sugar phosphate isomerase
BD02T64_scaffold_172_25
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24959..27217)
DNA (2259bp) protein (753aa)
Chondroitin AC/alginate lyase n=1 Tax=Pseudoalteromonas arctica A 37-1-2 RepID=U1KHZ7_9GAMM rbh
Alginate lyase {ECO:0000313|EMBL:KHD12144.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nel
alyll; chondroitin AC/alginate lyase
BD02T64_scaffold_172_26
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27228..29510)
DNA (2283bp) protein (761aa)
Poly(beta-D-mannuronate) lyase (EC:4.2.2.3) rbh
UPI0003D67AE4 related cluster n=1 Tax=unknown RepID=UPI0003D67AE4
Alginate lyase {ECO:0000313|EMBL:KHD12143.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nel
BD02T64_scaffold_172_27
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29869..30606
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20652 RepID=G7EBV3_9GAMM rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KHD12142.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candi
GntR family transcriptional regulator rbh
BD02T64_scaffold_172_28
Paraglaciecola agarilytica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31040..31468)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Glaciecola agarilytica NO2 RepID=K6W824_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC04734.1}; TaxID=1125747 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
hypothetical protein
BD02T64_scaffold_172_29
Marinomonas ushuaiensis, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31687..32571)
DNA (885bp) protein (295aa)
6-phosphogluconate dehydrogenase n=1 Tax=Vibrio breoganii RepID=UPI0002F1FFEB
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:ETX11894.1}; TaxID=1122207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas ushuaiensis
hypothetical protein
BD02T64_scaffold_172_30
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33057..34253)
DNA (1197bp) protein (399aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
Mannonate dehydratase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XFK6_9ALTE rbh
mannonate dehydratase rbh
Displaying items 1-30 of 88 in total

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