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BD02T64_scaffold_2139

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2139_1
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(326..1507)
DNA (1182bp) protein (394aa)
cystathionine gamma-synthase n=1 Tax=Leucothrix mucor RepID=UPI0003B46F4C
Cystathionine gamma-synthase {ECO:0000313|EMBL:EPJ53155.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax s
cystathionine gamma-synthase
BD02T64_scaffold_2139_2
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1884..2369)
DNA (486bp) protein (162aa)
AsnC family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LPL8_9RHIZ
Leucine-responsive regulatory protein, regulator for leucine (Or lrp) regulon and high-affinity branched-chain amino acid transport system {ECO:0000313|EMBL:KEA63532.1}; TaxID=1232683 species="Bacteri
AsnC family transcriptional regulator
BD02T64_scaffold_2139_3
unknown

Not on your lists

2692..2871
DNA (180bp) protein (60aa)

This feature has no annotations

BD02T64_scaffold_2139_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2986..3885)
DNA (900bp) protein (300aa)
Putative glycine cleavage operon activator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488B3_COLP3
glycine cleavage operon activator
Putative glycine cleavage operon activator {ECO:0000313|EMBL:AAZ26463.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colw
BD02T64_scaffold_2139_5
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4281..5180
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GLB9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJE44901.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
LysR family transcriptional regulator
BD02T64_scaffold_2139_6
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5175..6197)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GK54_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ49254.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_2139_7
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6448..7287)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UK4_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ97968.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_2139_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7614..8177
DNA (564bp) protein (188aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KGJ94097.1}; EC=2.4.2.8 {ECO:0000313|EMBL:KGJ94097.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Co
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484N2_COLP3
BD02T64_scaffold_2139_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8379..8546)
DNA (168bp) protein (56aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YZ9_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ86614.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
BD02T64_scaffold_2139_10
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9271..10707)
DNA (1437bp) protein (479aa)
Xanthine/uracil permease family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484N1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ97976.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
xanthine/uracil permease
BD02T64_scaffold_2139_11
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11224..12885
DNA (1662bp) protein (554aa)
Sulfate permease family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484N0_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ97977.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
sulfate permease
BD02T64_scaffold_2139_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12906..13343)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037C6A53
Uncharacterized protein {ECO:0000313|EMBL:KGJ89448.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_2139_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13805..14011)
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Colwellia piezophila RepID=UPI00036716CD rbh
cold shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain family protein {ECO:0000313|EMBL:AAZ25086.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Co
BD02T64_scaffold_2139_14
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..14444)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Psychromonas hadalis RepID=UPI0003B44702 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP30316.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitrati
BD02T64_scaffold_2139_15
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14880..15299)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003658062
Uncharacterized protein {ECO:0000313|EMBL:KGK00066.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_2139_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15440..15730)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F10 RepID=UPI00037F397A rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ93751.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
conserved hypothetical protein containing Dimeric alpha-beta barrel domain
BD02T64_scaffold_2139_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15821..16714)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Vibrio genomosp. F10 RepID=UPI0002D2F227 rbh
Transcriptional regulator with only HTH domain, AraC family {ECO:0000313|EMBL:KGJ93750.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia
putative AraC-type DNA-binding domain-containing protein
BD02T64_scaffold_2139_18
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16775..17239)
DNA (465bp) protein (155aa)
Acetyltransferase n=1 Tax=Pseudoalteromonas piscicida JCM 20779 RepID=U1KGB0_PSEO7 rbh
Acetyltransferase {ECO:0000313|EMBL:ERG36127.1}; TaxID=1117317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalter
putative Acyl-CoA N-acyltransferase
BD02T64_scaffold_2139_19
unknown

Not on your lists

comp(17292..17441)
DNA (150bp) protein (50aa)

This feature has no annotations

BD02T64_scaffold_2139_20
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17479..17763)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482Y1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89423.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_2139_21
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17869..18279)
DNA (411bp) protein (137aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CPV5_SHEPW
putative uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CED60522.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
BD02T64_scaffold_2139_22
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18512..18799)
DNA (288bp) protein (96aa)
Toxin relE n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YU08_9ALTE
Toxin relE {ECO:0000313|EMBL:GAC21657.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola arctica BSs20
RelE toxin
BD02T64_scaffold_2139_23
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18789..18884)
DNA (96bp) protein (32aa)
Uncharacterized protein {ECO:0000313|EMBL:GAC21658.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_2139_24
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18914..19762)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003798F68
Uncharacterized protein {ECO:0000313|EMBL:KJE44114.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
Displaying 24 items

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