ggKbase home page

BD02T64_scaffold_2069

Search features with annotation key words

Displaying items 1-30 of 31 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2069_1
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

631..1389
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6YMN7_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE41038.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_2069_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1412..3406)
DNA (1995bp) protein (665aa)
beta-ketoacyl-ACP synthase (EC:2.3.1.-)
Beta-ketoacyl-ACP synthase family protein {ECO:0000313|EMBL:AAZ25745.1}; EC=2.3.1.- {ECO:0000313|EMBL:AAZ25745.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales
beta-ketoacyl synthase n=1 Tax=Colwellia piezophila RepID=UPI00036FE297
BD02T64_scaffold_2069_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3424..4482
DNA (1059bp) protein (353aa)
Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UU5_COLP3
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AAZ25733.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_2069_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4582..5229
DNA (648bp) protein (216aa)
Putative dUTP diphosphatase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UU7_COLP3
dUTP diphosphatase
Putative dUTP diphosphatase {ECO:0000313|EMBL:AAZ26469.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
BD02T64_scaffold_2069_5
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5408..6058
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UU8_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KJE45675.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
BD02T64_scaffold_2069_6
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6166..6876
DNA (711bp) protein (237aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=MTNN_COLP3
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {ECO:0000256|HAMAP-Rule:MF_01684
MTA/SAH nucleosidase
BD02T64_scaffold_2069_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6903..7886
DNA (984bp) protein (328aa)
CobD/cbiB family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UY6_COLP3
cobD/cbiB family protein
CobD/cbiB family protein {ECO:0000313|EMBL:AAZ26930.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
BD02T64_scaffold_2069_8
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7956..8363
DNA (408bp) protein (136aa)
Phage shock protein E n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1JLB6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE38828.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
phage-shock protein
BD02T64_scaffold_2069_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8373..8996
DNA (624bp) protein (208aa)
membrane protein n=1 Tax=Colwellia piezophila RepID=UPI00036943FF
Uncharacterized protein {ECO:0000313|EMBL:KGJ96648.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_2069_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9130..9789)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00035E0CF0
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:KGJ94479.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
1-acyl-sn-glycerol-3-phosphate acyltransferase
BD02T64_scaffold_2069_11
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9820..10143)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037696F3
Uncharacterized protein {ECO:0000313|EMBL:KJE38830.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_2069_12
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10259..10726)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE45680.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
BD02T64_scaffold_2069_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10726..11295)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UZ0_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ26384.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_2069_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11371..11883)
DNA (513bp) protein (171aa)
NosL, partial n=1 Tax=Colwellia piezophila RepID=UPI00037DC999
nosL; protein disulfide isomerase
Protein disulfide isomerase NosL {ECO:0000313|EMBL:AAZ24974.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psyc
BD02T64_scaffold_2069_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11908..12726)
DNA (819bp) protein (273aa)
Copper ABC transporter, permease protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UZ3_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ96641.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
nosY; copper ABC transporter permease
BD02T64_scaffold_2069_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12726..13691)
DNA (966bp) protein (322aa)
Copper ABC transporter, ATP-binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UZ4_COLP3
nosF; copper ABC transporter ATP-binding protein
Copper ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAZ24223.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Col
BD02T64_scaffold_2069_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13684..15099)
DNA (1416bp) protein (472aa)
nitrous oxidase n=1 Tax=Colwellia piezophila RepID=UPI00036C01AE
Nitrous oxide reductase family maturation protein NosD {ECO:0000313|EMBL:KGJ94472.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliac
nosD; copper ABC transporter periplasmic copper-binding protein
BD02T64_scaffold_2069_18
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15439..17328)
DNA (1890bp) protein (630aa)
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Fla
Nitrous-oxide reductase n=2 Tax=Vibrio tubiashii RepID=F9TAC9_9VIBR rbh
nitrous-oxide reductase rbh
BD02T64_scaffold_2069_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17398..19533)
DNA (2136bp) protein (712aa)
Putative transcriptional regulator NosR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47UZ7_COLP3
transcriptional regulator NosR
Putative transcriptional regulator NosR {ECO:0000313|EMBL:AAZ28412.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwell
BD02T64_scaffold_2069_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19893..21092)
DNA (1200bp) protein (400aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYY_COLP3
BD02T64_scaffold_2069_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21228..22706
DNA (1479bp) protein (493aa)
Peptidase, M23/M37 family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47V02_COLP3
M24/M37 family peptidase
Peptidase, M23/M37 family {ECO:0000313|EMBL:AAZ24961.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_2069_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22699..23910
DNA (1212bp) protein (404aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000255|HAMAP-Rule:MF_01270}; EC=2.7.1.170 {ECO:0000255|HAMAP-Rule:MF_01270};; AnhMurNAc kinase {ECO:0000255|HAMAP-Rule:MF_01270}; TaxID=167879 species="Bacter
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ANMK_COLP3
anmK; anhydro-N-acetylmuramic acid kinase
BD02T64_scaffold_2069_23
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24099..24290
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47V04_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KJE38841.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_2069_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24488..26272
DNA (1785bp) protein (595aa)
Di-haem cytochrome c peroxidase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YZ2_COLP3 rbh
Di-heme cytochrome c peroxidase {ECO:0000313|EMBL:KGJ86609.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
di-heme cytochrome c peroxidase rbh
BD02T64_scaffold_2069_25
unknown

Not on your lists

26295..26468
DNA (174bp) protein (58aa)

This feature has no annotations

BD02T64_scaffold_2069_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26495..28042
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Col
Sensor histidine kinase BaeS n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YZ0_COLP3 rbh
baeS; sensor histidine kinase BaeS
BD02T64_scaffold_2069_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28070..28756
DNA (687bp) protein (229aa)
DNA-binding response regulator BaeR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YY9_COLP3
baeR; DNA-binding response regulator BaeR
DNA-binding response regulator BaeR {ECO:0000313|EMBL:AAZ25330.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
BD02T64_scaffold_2069_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28847..30049)
DNA (1203bp) protein (401aa)
Multidrug resistance transporter, Bcr/CflA family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VB4_COLP3
Bcr/CflA family multidrug resistance transporter
Multidrug resistance transporter, Bcr/CflA family {ECO:0000313|EMBL:AAZ26693.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" sourc
BD02T64_scaffold_2069_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30046..31548)
DNA (1503bp) protein (501aa)
aminotransferase (EC:2.6.1.-)
aminotransferase n=1 Tax=Colwellia piezophila RepID=UPI00035C5611
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:KGJ91634.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacte
BD02T64_scaffold_2069_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31686..32609
DNA (924bp) protein (308aa)
membrane protein n=1 Tax=Colwellia piezophila RepID=UPI000365C13F
Uncharacterized protein {ECO:0000313|EMBL:KGJ91635.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
membrane protein
Displaying items 1-30 of 31 in total

View Taxonomy