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BD02T64_scaffold_2895

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2895_1
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(84..908)
DNA (825bp) protein (275aa)
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A3A5_BACTN
Two-component system sensor histidine kinase/response regulator, hybrid (One-component system) {ECO:0000313|EMBL:AAO78155.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
two-component system sensor histidine kinase/response regulator
BD02T64_scaffold_2895_2
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1212..3110
DNA (1899bp) protein (633aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6ZFQ7_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC22245.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
hypothetical protein
BD02T64_scaffold_2895_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3208..4659)
DNA (1452bp) protein (484aa)
potassium transporter n=1 Tax=Colwellia piezophila RepID=UPI00036F215C
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
trkH; Trk system potassium uptake protein TrkH
BD02T64_scaffold_2895_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4721..5116)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000380697E
Uncharacterized protein {ECO:0000313|EMBL:KGJ96732.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_2895_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5383..6714)
DNA (1332bp) protein (444aa)
pepQ; proline dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279}; Short=X-Pro dipeptidase {ECO:0000255|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000255|HAMAP-Rule:MF_01279};; Imidodipeptidase {ECO:0000255|HAMAP-R
proline dipeptidase n=1 Tax=Colwellia piezophila RepID=UPI00037A4A80
BD02T64_scaffold_2895_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6846..8780)
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000381FF01
Lytic transglycosylase catalytic {ECO:0000313|EMBL:KGJ96734.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
soluble lytic murein transglycosylase
BD02T64_scaffold_2895_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8931..9176
DNA (246bp) protein (82aa)
Sulfurtransferase TusA homolog {ECO:0000256|HAMAP-Rule:MF_00413}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00413};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Co
sulfurtransferase n=1 Tax=Colwellia piezophila RepID=UPI00036F9532
sirA; sirA protein
BD02T64_scaffold_2895_8
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9277..9936
DNA (660bp) protein (220aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadal
Signal peptidase I n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KP90_SHEWM
BD02T64_scaffold_2895_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10031..12109)
DNA (2079bp) protein (693aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYGB_COLP3
BD02T64_scaffold_2895_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12109..13035)
DNA (927bp) protein (309aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
glycyl-tRNA synthetase n=1 Tax=Colwellia piezophila RepID=UPI00036BDAAD
BD02T64_scaffold_2895_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13168..15534)
DNA (2367bp) protein (789aa)
gyrB; DNA gyrase, B subunit (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=167879 species="Bacteria; Pr
DNA gyrase subunit B n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AS4_COLP3
BD02T64_scaffold_2895_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15590..16708)
DNA (1119bp) protein (373aa)
DNA replication and repair protein RecF n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RECF_COLP3
recF; DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000255|HAMAP-Rule:MF_00365}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Col
BD02T64_scaffold_2895_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16757..17860)
DNA (1104bp) protein (368aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=28229 species="Bacteri
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Colwellia piezophila RepID=UPI000377EE67
BD02T64_scaffold_2895_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17927..19294)
DNA (1368bp) protein (456aa)
chromosomal replication initiation protein n=1 Tax=Colwellia piezophila RepID=UPI00035FD87A
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Co
dnaA; chromosomal replication initiator protein DnaA
BD02T64_scaffold_2895_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19995..20378
DNA (384bp) protein (128aa)
rnpA; ribonuclease P protein component (EC:3.1.26.5)
ribonuclease P n=1 Tax=Colwellia piezophila RepID=UPI00037D3C63
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
BD02T64_scaffold_2895_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20345..20593
DNA (249bp) protein (83aa)
membrane protein insertion efficiency factor n=1 Tax=Colwellia piezophila RepID=UPI00036422BB
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000255|HAMAP-Rule:MF_00386}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.
BD02T64_scaffold_2895_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20746..22380
DNA (1635bp) protein (545aa)
Membrane protein insertase YidC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47U35_COLP3
inner membrane protein, 60 kDa
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
BD02T64_scaffold_2895_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22551..23966
DNA (1416bp) protein (472aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Col
tRNA modification GTPase MnmE n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=MNME_COLP3
trmE; tRNA modification GTPase TrmE
BD02T64_scaffold_2895_19
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24155..24595
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=2 Tax=Shewanella baltica RepID=G0AZC3_9GAMM rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEG10275.1}; TaxID=693974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella b
BD02T64_scaffold_2895_20
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24695..24928
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Shewanella benthica KT99 RepID=A9D086_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDQ02077.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benthica K
RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE)
BD02T64_scaffold_2895_21
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24915..25178
DNA (264bp) protein (88aa)
Plasmid stabilization system n=1 Tax=Shewanella benthica KT99 RepID=A9D084_9GAMM
Plasmid stabilization system {ECO:0000313|EMBL:EDQ02076.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benth
plasmid stabilization system
BD02T64_scaffold_2895_22
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25288..25647
DNA (360bp) protein (120aa)
Glyoxalase n=1 Tax=Psychromonas sp. CNPT3 RepID=M4U5L0_9GAMM rbh
putative uncharacterized protein, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Uncharacterized protein {ECO:0000313|EMBL:CED59693.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella viscosa.;"
BD02T64_scaffold_2895_23
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25711..26265
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036B424E
Uncharacterized protein {ECO:0000313|EMBL:KJE41375.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_2895_24
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26298..26687
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FIG9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHD12296.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
BD02T64_scaffold_2895_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26807..27091
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482Y1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ96198.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_2895_26
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27216..27428
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YSL7_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC21167.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_2895_27
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27637..27888
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FGQ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDM65708.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
membrane protein
BD02T64_scaffold_2895_28
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27934..28179
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Alteromonas macleodii (strain English Channel 673) RepID=K0CTC3_ALTME
Uncharacterized protein {ECO:0000313|EMBL:AJP42793.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas austra
hypothetical protein
BD02T64_scaffold_2895_29
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28211..28567
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J7P0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFL37571.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
BD02T64_scaffold_2895_30
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28658..29080
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZCT8_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC33891.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
MaoC domain-containing protein dehydratase
Displaying items 1-30 of 43 in total

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