ggKbase home page

BD02T64_scaffold_4391

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_4391_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..440)
DNA (438bp) protein (146aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486M6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ91870.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
lipoprotein
BD02T64_scaffold_4391_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1491
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000362B042 rbh
Peptidase M23 {ECO:0000313|EMBL:KGJ91871.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
M23/37 family peptidase
BD02T64_scaffold_4391_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1526..2014)
DNA (489bp) protein (163aa)
glutathione-S-transferase n=1 Tax=Colwellia piezophila RepID=UPI000369A245
Uncharacterized protein {ECO:0000313|EMBL:KGJ87213.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
glutathione-S-transferase domain-containing protein
BD02T64_scaffold_4391_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1957..2262)
DNA (306bp) protein (102aa)
glutathione-S-transferase n=1 Tax=Colwellia piezophila RepID=UPI000369A245
Uncharacterized protein {ECO:0000313|EMBL:KGJ91779.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
glutathione-S-transferase domain-containing protein
BD02T64_scaffold_4391_5
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2326..3213)
DNA (888bp) protein (296aa)
Putative lipoprotein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C458_HYPNA
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:KCZ96303.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas hirschiana
BD02T64_scaffold_4391_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3394..3720
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BHZ7_NEPCE rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ94893.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_4391_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3803..4504
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002D65A81 rbh
WYL domain containing protein {ECO:0000313|EMBL:KGJ94892.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
HTH domain-containing protein
BD02T64_scaffold_4391_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4533..5114)
DNA (582bp) protein (194aa)
TetR family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI000375B486
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AAZ25437.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_4391_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5423..6259
DNA (837bp) protein (279aa)
12-oxophytodienoate reductase {ECO:0000313|EMBL:KGJ94894.1}; EC=1.3.1.42 {ECO:0000313|EMBL:KGJ94894.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliac
Oxidoreductase, FAD/FMN-binding n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485X5_COLP3
oxidoreductase, FAD/FMN-binding
BD02T64_scaffold_4391_10
unknown

Not on your lists

6720..7325
DNA (606bp) protein (202aa)

This feature has no annotations

BD02T64_scaffold_4391_11
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7426..8640)
DNA (1215bp) protein (405aa)
DEAD-box ATP dependent DNA helicase n=1 Tax=Glaciecola psychrophila 170 PF9_9ALTE">RepID=K7APF9_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KJE41367.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
DEAD-box ATP dependent DNA helicase
BD02T64_scaffold_4391_12
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8711..9169)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485V2_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ99226.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_4391_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9225..10769)
DNA (1545bp) protein (515aa)
heme ABC transporter ATP-binding protein n=1 Tax=Colwellia piezophila RepID=UPI0003667F56
ABC transporter related protein {ECO:0000313|EMBL:KGJ96871.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
ABC transporter ATP-binding protein
BD02T64_scaffold_4391_14
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..11325)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HWA3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ49503.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_4391_15
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11419..12324
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Osedax symbiont Rs2 RepID=S6GLV4_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EPJ46994.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source=
LysR family transcriptional regulator
BD02T64_scaffold_4391_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12390..13547)
DNA (1158bp) protein (386aa)
aldehyde oxidoreductase n=1 Tax=Thiomicrospira arctica RepID=UPI00037ACC47 rbh
alcohol dehydrogenase
Alcohol dehydrogenase, iron-containing {ECO:0000313|EMBL:AAZ27027.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_4391_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13575..14264)
DNA (690bp) protein (230aa)
dimethylallyltransferase n=1 Tax=Thiomicrospira arctica RepID=UPI000380E346 rbh
ThiJ/PfpI family protein
ThiJ/PfpI family protein {ECO:0000313|EMBL:AAZ25290.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
BD02T64_scaffold_4391_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14448..15323
DNA (876bp) protein (292aa)
Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q487T2_COLP3
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAZ24578.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_4391_19
unknown

Not on your lists

15394..15699
DNA (306bp) protein (102aa)

This feature has no annotations

BD02T64_scaffold_4391_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15798..17042
DNA (1245bp) protein (415aa)
Putative Na+/H+ antiporter NhaD n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480L5_COLP3
Na+/H+ antiporter NhaD
Putative Na+/H+ antiporter NhaD {ECO:0000313|EMBL:AAZ25557.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
BD02T64_scaffold_4391_21
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17135..17695)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI00031889A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWH11081.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum agari
CBS domain-containing protein
BD02T64_scaffold_4391_22
unknown

Not on your lists

comp(17933..18235)
DNA (303bp) protein (101aa)

This feature has no annotations

BD02T64_scaffold_4391_23
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18607..19344
DNA (738bp) protein (246aa)
Short chain dehydrogenase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YS66_OLEAN rbh
Short chain dehydrogenase {ECO:0000313|EMBL:CCK74939.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
short chain dehydrogenase
BD02T64_scaffold_4391_24
unknown

Not on your lists

19594..19653
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 24 items

View Taxonomy