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BD02T64_scaffold_1751

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1751_1
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
nuoB; NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B n=1 Tax=Osedax symbiont Rs2 RepID=S6GP35_9GAMM
BD02T64_scaffold_1751_2
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242..670)
DNA (429bp) protein (143aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Y6M1_9ALTE
nuoA2; NADH dehydrogenase I subunit A
BD02T64_scaffold_1751_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1382..1846
DNA (465bp) protein (155aa)
UPF0178 protein CPS_3584 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Y3584_COLP3
UPF0178 protein GAB14E_0113 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
hypothetical protein
BD02T64_scaffold_1751_4
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2007..2804
DNA (798bp) protein (266aa)
Kef-type K+ transport system NAD-binding protein n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1JNC3_9GAMM rbh
Kef-type K+ transport system NAD-binding protein {ECO:0000313|EMBL:ERG18150.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalt
Kef-type K+ transport system NAD-binding protein
BD02T64_scaffold_1751_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2966..3325)
DNA (360bp) protein (120aa)
Putative granule-associated protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WT2_COLP3
granule-associated protein
Phasin family protein {ECO:0000313|EMBL:KGJ95627.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
BD02T64_scaffold_1751_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3528..3908)
DNA (381bp) protein (127aa)
Putative granule-associated protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WT2_COLP3
granule-associated protein
Putative granule-associated protein {ECO:0000313|EMBL:AAZ24914.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
BD02T64_scaffold_1751_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4100..4939)
DNA (840bp) protein (280aa)
Putative granule-associated protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WT1_COLP3
granule-associated protein
Putative granule-associated protein {ECO:0000313|EMBL:AAZ26179.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
BD02T64_scaffold_1751_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5035..5466)
DNA (432bp) protein (144aa)
Putative polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WT0_COLP3
polyhydroxyalkanoate synthesis repressor PhaR
Putative polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:AAZ25914.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;"
BD02T64_scaffold_1751_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5615..7378)
DNA (1764bp) protein (588aa)
phbC; poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-)
Poly-beta-hydroxybutyrate polymerase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WS9_COLP3
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:KGJ95624.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
BD02T64_scaffold_1751_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7699..8916
DNA (1218bp) protein (406aa)
phaZ; polyhydroxyalkanoate depolymerase (EC:3.1.1.-)
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:AAZ24356.1}; EC=3.1.1.- {ECO:0000313|EMBL:AAZ24356.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromo
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WS7_COLP3 rbh
BD02T64_scaffold_1751_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9438..10160
DNA (723bp) protein (241aa)
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:KGJ95621.1}; EC=1.1.1.36 {ECO:0000313|EMBL:KGJ95621.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
phbB2; acetoacetyl-CoA reductase (EC:1.1.1.36)
Acetoacetyl-CoA reductase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WS5_COLP3
BD02T64_scaffold_1751_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10272..10943)
DNA (672bp) protein (224aa)
Metallo-beta-lactamase family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y66_COLP3
Beta-lactamase domain protein {ECO:0000313|EMBL:KGJ93011.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
metallo-beta-lactamase
BD02T64_scaffold_1751_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11199..12086)
DNA (888bp) protein (296aa)
Substrate-binding transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47WL0_COLP3
LysR family transcriptional regulator
Substrate-binding transcriptional regulator, LysR family {ECO:0000313|EMBL:AAZ24485.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;
BD02T64_scaffold_1751_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12779..14113
DNA (1335bp) protein (445aa)
Transporter n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y65_COLP3
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio
sodium-dependent symporter family protein
BD02T64_scaffold_1751_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14167..15483)
DNA (1317bp) protein (439aa)
DNA recombination protein RmuC n=1 Tax=Colwellia piezophila RepID=UPI00036E6D2A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28102.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1751_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15563..16360)
DNA (798bp) protein (266aa)
Transcriptional regulator, IclR family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y62_COLP3
Beta-ketoadipate pathway transcriptional regulator PcaR/PcaU, IclR family {ECO:0000313|EMBL:KGJ93015.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliac
IclR family transcriptional regulator
BD02T64_scaffold_1751_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16590..17300
DNA (711bp) protein (237aa)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:KGJ93016.1}; EC=2.8.3.6 {ECO:0000313|EMBL:KGJ93016.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
pcaI; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.8)
3-oxoadipate CoA-transferase, alpha subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y61_COLP3
BD02T64_scaffold_1751_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17312..18004
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:KGJ93017.1}; EC=2.8.3.6 {ECO:0000313|EMBL:KGJ93017.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colw
pcaJ; 3-oxoadipate CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase, beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y60_COLP3
BD02T64_scaffold_1751_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18073..19392
DNA (1320bp) protein (440aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:KGJ93018.1}; EC=5.4.3.8 {ECO:0000313|EMBL:KGJ93018.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Putative glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y59_COLP3
glutamate-1-semialdehyde-2,1-aminomutase
BD02T64_scaffold_1751_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19398..20600
DNA (1203bp) protein (401aa)
pcaF; beta-ketoadipyl CoA thiolase (EC:2.3.1.-)
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:AAZ28145.1}; EC=2.3.1.- {ECO:0000313|EMBL:AAZ28145.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliace
Beta-ketoadipyl CoA thiolase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y58_COLP3
BD02T64_scaffold_1751_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20696..20911
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2J319_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EZQ20172.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
BD02T64_scaffold_1751_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21205..21468
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003681149
UPF0250 protein GAB14E_1919 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
hypothetical protein
BD02T64_scaffold_1751_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21520..22206
DNA (687bp) protein (229aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipoate-protein ligase B n=1 Tax=Colwellia piezophila RepID=UPI000365C12F
lipB; lipoate-protein ligase B
BD02T64_scaffold_1751_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22206..23186
DNA (981bp) protein (327aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate syntha
Lipoyl synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=LIPA_COLP3
lipA; lipoyl synthase
BD02T64_scaffold_1751_25
Vibrio fluvialis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23366..24097)
DNA (732bp) protein (244aa)
short-chain dehydrogenase n=1 Tax=Moritella dasanensis RepID=UPI0003071F93 rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EPP24088.1}; TaxID=1336752 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fluv
oxidoreductase, short-chain dehydrogenase/reductase family
BD02T64_scaffold_1751_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24298..24696)
DNA (399bp) protein (133aa)
PAS repeat protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485X2_COLP3
PAS sensor protein {ECO:0000313|EMBL:KGJ91469.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vi
PAS repeat-containing protein
BD02T64_scaffold_1751_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24911..26194)
DNA (1284bp) protein (428aa)
TPR domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X41_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ90364.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
TPR domain-containing protein
BD02T64_scaffold_1751_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26299..26931)
DNA (633bp) protein (211aa)
Putative TonB protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X40_COLP3
TonB protein
TonB family protein {ECO:0000313|EMBL:KGJ89148.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_1751_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26952..27362)
DNA (411bp) protein (137aa)
Biopolymer transport exbD protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X39_COLP3
exbD3; biopolymer transport exbD protein
Biopolymer transport exbD protein {ECO:0000313|EMBL:AAZ25847.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psy
BD02T64_scaffold_1751_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27436..27759)
DNA (324bp) protein (108aa)
Biopolymer transport exbB protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X38_COLP3
exbB3; biopolymer transport exbB protein
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:KGJ90361.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
Displaying 30 items

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