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BD02T64_scaffold_1815

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1815_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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43..2376
DNA (2334bp) protein (778aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SYFB_COLP3
BD02T64_scaffold_1815_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2432..2725
DNA (294bp) protein (98aa)
Integration host factor subunit alpha n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=IHFA_COLP3
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Altero
BD02T64_scaffold_1815_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3159..4946
DNA (1788bp) protein (596aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:KGJ97935.1}; EC=3.6.3.44 {ECO:0000313|EMBL:KGJ97935.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwellia
ABC transporter, ATP-binding/permease protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZT9_COLP3
ABC transporter ATP-binding/permease
BD02T64_scaffold_1815_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4960..5610
DNA (651bp) protein (217aa)
lipoprotein signal peptidase n=1 Tax=Colwellia piezophila RepID=UPI0003794D75
Uncharacterized protein {ECO:0000313|EMBL:KGJ89602.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1815_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5615..6289
DNA (675bp) protein (225aa)
Transporter, LysE family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZU2_COLP3
amino acid transporter LysE
Transporter, LysE family {ECO:0000313|EMBL:AAZ25123.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
BD02T64_scaffold_1815_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6394..7239
DNA (846bp) protein (282aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZU3_COLP3
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ28415.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_1815_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7271..8143
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003816579
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase {ECO:0000313|EMBL:KGJ97940.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliace
bax protein
BD02T64_scaffold_1815_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8145..9113)
DNA (969bp) protein (323aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=TTCA_COLP3
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source
PP-loop family protein
BD02T64_scaffold_1815_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9269..10210)
DNA (942bp) protein (314aa)
Universal stress protein family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483Q0_COLP3
UspA domain-containing protein {ECO:0000313|EMBL:KGJ89944.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychre
universal stress protein UspE
BD02T64_scaffold_1815_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10516..11235)
DNA (720bp) protein (240aa)
Fumarate/nitrate reduction regulatory protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P9_COLP3
fnr; fumarate/nitrate reduction transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KGJ87599.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
BD02T64_scaffold_1815_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11326..12066)
DNA (741bp) protein (247aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P8_COLP3
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ25228.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_1815_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12063..12296)
DNA (234bp) protein (78aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P7_COLP3
cytochrome oxidase maturation protein, cbb3-type
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:AAZ25911.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source
BD02T64_scaffold_1815_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12321..14717)
DNA (2397bp) protein (799aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AAZ25531.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AAZ25531.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwe
Copper-translocating P-type ATPase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P6_COLP3
BD02T64_scaffold_1815_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14754..15248)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P5_COLP3
FixH family protein {ECO:0000313|EMBL:KGJ87603.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (V
hypothetical protein
BD02T64_scaffold_1815_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15433..16404)
DNA (972bp) protein (324aa)
ccoP; cytochrome c oxidase, cbb3-type, subunit III (EC:1.9.3.1)
cytochrome CBB3 n=1 Tax=Colwellia piezophila RepID=UPI0003712E69
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwell
BD02T64_scaffold_1815_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16407..16604)
DNA (198bp) protein (66aa)
ccoQ; cytochrome c oxidase, cbb3-type, CcoQ subunit (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, CcoQ subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P3_COLP3
CcoQ, cytochrome c oxidase, cbb3-type, CcoQ subunit {ECO:0000313|EMBL:KGJ87605.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" sour
BD02T64_scaffold_1815_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16625..17281)
DNA (657bp) protein (219aa)
ccoO; cytochrome c oxidase, cbb3-type, subunit II (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P2_COLP3
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:KGJ89936.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colw
BD02T64_scaffold_1815_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17293..18717)
DNA (1425bp) protein (475aa)
ccoN; cytochrome c oxidase, cbb3-type, subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AAZ24439.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AAZ24439.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483P1_COLP3 rbh
BD02T64_scaffold_1815_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19744..20235
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00035DB655
Uncharacterized protein {ECO:0000313|EMBL:KGJ87609.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
lipoprotein
BD02T64_scaffold_1815_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20328..21956)
DNA (1629bp) protein (543aa)
Putative membrane-bound lytic murein transglycosylase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N8_COLP3
Lytic transglycosylase catalytic {ECO:0000313|EMBL:KGJ89932.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psych
membrane-bound lytic murein transglycosylase
BD02T64_scaffold_1815_21
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22058..22864)
DNA (807bp) protein (269aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
hydroxyacylglutathione hydrolase n=1 Tax=Colwellia piezophila RepID=UPI00037F8C9E
metallo-beta-lactamase
BD02T64_scaffold_1815_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22984..23799
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N6_COLP3
Methyltransferase type 11 {ECO:0000313|EMBL:KGJ87612.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
hypothetical protein
BD02T64_scaffold_1815_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23843..24601
DNA (759bp) protein (253aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=28229 species="Bacteria;
metal-binding protein n=1 Tax=Colwellia piezophila RepID=UPI00036B3CF0
hypothetical protein
BD02T64_scaffold_1815_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24662..25384)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483N4_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ87614.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
Displaying 24 items

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