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BD02T64_scaffold_1967

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1967_1
Shewanella sp. HN-41, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..633
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000380C4CA
Putative membrane-bound ClpP-class protease associated with {ECO:0000313|EMBL:EGM70891.1}; TaxID=327275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewane
hypothetical protein
BD02T64_scaffold_1967_2
Vibrio proteolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

637..1431
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Vibrio proteolyticus NBRC 13287 RepID=U2ZWF3_VIBPR rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD65427.1}; TaxID=1219065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio proteolyticus NBRC 1328
hypothetical protein
BD02T64_scaffold_1967_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..1873)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000378044C rbh
Glyoxalase-like domain containing protein {ECO:0000313|EMBL:KGJ94837.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
glyoxalase/bleomycin resistance protein/dioxygenase
BD02T64_scaffold_1967_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1888..2112)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZB91_SHEVD
Uncharacterized protein {ECO:0000313|EMBL:KGJ95711.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_1967_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2356..3033
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486M7_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ91869.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1967_6
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3097..3501
DNA (405bp) protein (135aa)
Lactoylglutathione lyase n=1 Tax=Grimontia sp. AK16 RepID=R1IA25_9GAMM
Glyoxalase family protein {ECO:0000313|EMBL:AKE52505.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojed
bleomycin resistance protein
BD02T64_scaffold_1967_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3547..3759)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q481C7_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ93732.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1967_8
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3830..4195)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q6LKL9_PHOPR
Uncharacterized protein {ECO:0000313|EMBL:KJE48203.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
BD02T64_scaffold_1967_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4474..4947
DNA (474bp) protein (158aa)
Protein tyrosine phosphatase {ECO:0000313|EMBL:KGJ97911.1}; EC=3.1.3.2 {ECO:0000313|EMBL:KGJ97911.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliacea
phosphotyrosine protein phosphatase (EC:3.1.3.48)
Phosphotyrosine protein phosphatase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZQ5_COLP3
BD02T64_scaffold_1967_10
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5028..6890)
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6ZPI2_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC25255.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
putative alkaline phosphatase rbh
BD02T64_scaffold_1967_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7201..8247)
DNA (1047bp) protein (349aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZQ6_COLP3
BD02T64_scaffold_1967_12
unknown

Not on your lists

8655..9218
DNA (564bp) protein (188aa)

This feature has no annotations

BD02T64_scaffold_1967_13
unknown

Not on your lists

comp(9187..9672)
DNA (486bp) protein (162aa)

This feature has no annotations

BD02T64_scaffold_1967_14
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9967..10776)
DNA (810bp) protein (270aa)
PEP synthetase regulatory protein n=1 Tax=Colwellia piezophila RepID=UPI00037B781B
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Sho
hypothetical protein
BD02T64_scaffold_1967_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11005..11661
DNA (657bp) protein (219aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037BF52A
BD02T64_scaffold_1967_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11640..13346
DNA (1707bp) protein (569aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037BF52A
BD02T64_scaffold_1967_17
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13516..14145)
DNA (630bp) protein (210aa)
Lysine exporter protein LysE/YggA n=1 Tax=Osedax symbiont Rs1 RepID=S6HHJ1_9GAMM
Lysine exporter protein LysE/YggA {ECO:0000313|EMBL:EPJ44427.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Ose
rhtB; RhtB protein
BD02T64_scaffold_1967_18
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14267..14737)
DNA (471bp) protein (157aa)
Putative hydrolase n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8WA28_MARHY
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CCG97247.1}; TaxID=1163748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocar
BD02T64_scaffold_1967_19
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14791..15318)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6HRY1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ47851.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
putative uncharacterized protein
BD02T64_scaffold_1967_20
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15640..16617)
DNA (978bp) protein (326aa)
Quinone oxidoreductase {ECO:0000313|EMBL:ETY84282.1}; EC=1.6.5.5 {ECO:0000313|EMBL:ETY84282.1};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae;
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003715504
alcohol dehydrogenase zinc-binding domain protein
BD02T64_scaffold_1967_21
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16716..17585
DNA (870bp) protein (290aa)
Transcriptional regulator n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JDX0_9BURK
Transcriptional regulator {ECO:0000313|EMBL:ESJ26156.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp.
transcriptional regulator
BD02T64_scaffold_1967_22

Not on your lists

comp(17616..18035)
DNA (420bp) protein (140aa)
Uncharacterized protein n=3 Tax=Pseudoalteromonas RepID=M5H6F0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN17834.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1967_23
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18267..19958)
DNA (1692bp) protein (564aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=314277 spe
Formate--tetrahydrofolate ligase n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8X5_9GAMM
formyltetrahydrofolate synthetase
BD02T64_scaffold_1967_24
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20128..20535
DNA (408bp) protein (136aa)
formate dehydrogenase subunit D n=1 Tax=gamma proteobacterium SCGC AAA007-O20 RepID=UPI000287BB69
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;"
BD02T64_scaffold_1967_25
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20594..20893
DNA (300bp) protein (100aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=GWA2_Bacteroidetes_40_15_curated
fdhF; formate dehydrogenase subunit alpha (fdhF-2) (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit id=3784872 bin=GWF2_Bacteroidetes_41_9 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
BD02T64_scaffold_1967_26
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20945..21412)
DNA (468bp) protein (156aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=3 Tax=Alteromonas macleodii RepID=S5B970_ALTMA rbh
ybaK/ebsC protein
BD02T64_scaffold_1967_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21652..23025
DNA (1374bp) protein (458aa)
Exonuclease SbcD n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G5_COLP3
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:KGJ92036.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
sbcD; exonuclease SbcD
BD02T64_scaffold_1967_28
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23022..26480
DNA (3459bp) protein (1153aa)
Nuclease sbcCD subunit C n=1 Tax=Erwinia piriflorinigrans CFBP 5888 RepID=V5Z4V9_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ92878.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
sbcC; ATP-dependent dsDNA exonuclease
BD02T64_scaffold_1967_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26502..27416
DNA (915bp) protein (305aa)
Membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G7_COLP3
membrane protein
Membrane protein {ECO:0000313|EMBL:AAZ25698.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (str
BD02T64_scaffold_1967_30
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27495..28031
DNA (537bp) protein (179aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
slyD1; FKBP-type peptidylprolyl isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Colwellia piezophila RepID=UPI00036BA1FB
Displaying items 1-30 of 40 in total

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