ggKbase home page

BD02T64_scaffold_22

Search features with annotation key words

Displaying items 391-420 of 563 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_22_391
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(473085..473471)
-----------------
DNA (387bp)
protein (129aa)
SmpA/OmlA family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XI1_COLP3
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
SmpA/OmlA family protein
BD02T64_scaffold_22_392
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(473600..475369)
-----------------
DNA (1770bp)
protein (590aa)
DNA repair protein RecN n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XI2_COLP3
recN; DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
BD02T64_scaffold_22_393
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(475436..476317)
-----------------
DNA (882bp)
protein (294aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=PPNK_COLP3
BD02T64_scaffold_22_394
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

476497..477132
-----------------
DNA (636bp)
protein (212aa)
Protein GrpE n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=GRPE_COLP3
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Al
grpE; co-chaperone GrpE
BD02T64_scaffold_22_395
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

477386..479311
-----------------
DNA (1926bp)
protein (642aa)
Chaperone protein DnaK 2 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DNAK2_COLP3
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK2; molecular chaperone DnaK
BD02T64_scaffold_22_396
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

479588..480730
-----------------
DNA (1143bp)
protein (381aa)
Chaperone protein DnaJ n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DNAJ_COLP3
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;
dnaJ; molecular chaperone DnaJ
BD02T64_scaffold_22_397
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(480838..481683)
-----------------
DNA (846bp)
protein (282aa)
Uncharacterized protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SVZ3_PSYIN
Uncharacterized protein {ECO:0000313|EMBL:KGK01649.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
hypothetical protein
BD02T64_scaffold_22_398
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

481871..482170
-----------------
DNA (300bp)
protein (100aa)
Propeptide PepSY amd peptidase M4 n=2 Tax=Shewanella baltica RepID=B8ECP8_SHEB2
Uncharacterized protein {ECO:0000313|EMBL:KGK01650.1}; Flags: Precursor;; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source=
propeptide PepSY amd peptidase M4
BD02T64_scaffold_22_399
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

482173..482850
-----------------
DNA (678bp)
protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QGG3_SHELP rbh
Response regulator receiver protein {ECO:0000313|EMBL:KGK01651.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalas
two component transcriptional regulator
BD02T64_scaffold_22_400
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

482850..484229
-----------------
DNA (1380bp)
protein (460aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Tha
Sensor histidine kinase with ATPase domain n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FYC8_SHESH
sensor histidine kinase
BD02T64_scaffold_22_401
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

484311..485630
-----------------
DNA (1320bp)
protein (440aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CQD6_SHEPW
Uncharacterized protein {ECO:0000313|EMBL:KGJ91473.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_22_402
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(485670..486134)
-----------------
DNA (465bp)
protein (155aa)
Transcriptional regulator, AsnC family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XI8_COLP3
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGJ96389.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
AsnC family transcriptional regulator
BD02T64_scaffold_22_403
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

486386..487570
-----------------
DNA (1185bp)
protein (395aa)
hypothetical protein n=1 Tax=Gayadomonas joobiniege RepID=UPI00036785DB
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alte
nhaA; Na(+)/H(+) antiporter nhaA
BD02T64_scaffold_22_404
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

487637..488212
-----------------
DNA (576bp)
protein (192aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XJ5_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ25687.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_22_405
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

488205..489380
-----------------
DNA (1176bp)
protein (392aa)
Putative inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XJ6_COLP3
inorganic polyphosphate/ATP-NAD kinase
Putative inorganic polyphosphate/ATP-NAD kinase {ECO:0000313|EMBL:AAZ26396.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source=
BD02T64_scaffold_22_406
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

489422..490027
-----------------
DNA (606bp)
protein (202aa)
Recombination protein RecR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RECR_COLP3
recR; recombination protein RecR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
BD02T64_scaffold_22_407
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

490248..492209
-----------------
DNA (1962bp)
protein (654aa)
Chaperone protein HtpG n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=HTPG_COLP3
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:M
htpG; heat shock protein 90
BD02T64_scaffold_22_408
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

492440..493084
-----------------
DNA (645bp)
protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase n=1 Tax=Colwellia piezophila RepID=UPI00036584F0
adenylate kinase
BD02T64_scaffold_22_409
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

493188..493580
-----------------
DNA (393bp)
protein (131aa)
hypothetical protein n=1 Tax=Kangiella aquimarina RepID=UPI00037803C7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE44431.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
MAPEG superfamily glutathione S-transferase
BD02T64_scaffold_22_410
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(493577..494053)
-----------------
DNA (477bp)
protein (159aa)
Acetyltransferase, GNAT family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XA9_COLP3
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AAZ25985.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
BD02T64_scaffold_22_411
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(494061..494357)
-----------------
DNA (297bp)
protein (99aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XB0_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ96461.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_412
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(494452..495339)
-----------------
DNA (888bp)
protein (296aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XB1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ96460.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_22_413
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(495422..496042)
-----------------
DNA (621bp)
protein (207aa)
hisI; phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Colwellia piezophila RepID=UPI00037618ED
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" so
BD02T64_scaffold_22_414
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(496036..496812)
-----------------
DNA (777bp)
protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
imidazole glycerol phosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI0003811A0B
BD02T64_scaffold_22_415
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(496877..497614)
-----------------
DNA (738bp)
protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Colwellia piezophila RepID=UPI000369D906
BD02T64_scaffold_22_416
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(497611..498255)
-----------------
DNA (645bp)
protein (215aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
imidazole glycerol phosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037BF952
BD02T64_scaffold_22_417
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(498267..499352)
-----------------
DNA (1086bp)
protein (362aa)
hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis bifunctional protein HisB {ECO:0000255|HAMAP-Rule:MF_01022}; Includes:; Histidinol-phosphatase {ECO:0000255|HAMAP-Rule:MF_01022}; EC=3.1.3.15 {ECO:0000255|HAMAP-Rule:MF_01022};;
Histidine biosynthesis bifunctional protein HisB n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=HIS7_COLP3
BD02T64_scaffold_22_418
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(499349..500428)
-----------------
DNA (1080bp)
protein (360aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000381D1ED
BD02T64_scaffold_22_419
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(500428..501732)
-----------------
DNA (1305bp)
protein (435aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
hisD2; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase 1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=HISX1_COLP3
BD02T64_scaffold_22_420
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(501901..502803)
-----------------
DNA (903bp)
protein (301aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00037772FE
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
Displaying items 391-420 of 563 in total

View Taxonomy