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BD02T64_scaffold_22

Search features with annotation key words

Displaying items 421-450 of 563 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_22_421
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

503332..503664
-----------------
DNA (333bp)
protein (111aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037ECECA
Uncharacterized protein {ECO:0000313|EMBL:KGJ96449.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_422
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

503723..505666
-----------------
DNA (1944bp)
protein (648aa)
ATP-dependent helicase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XC2_COLP3
Helicase c2 {ECO:0000313|EMBL:KGJ93263.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio ps
ATP-dependent helicase
BD02T64_scaffold_22_423
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

505758..506480
-----------------
DNA (723bp)
protein (241aa)
Putative glycoprotease family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T7_COLP3
Universal protein YeaZ {ECO:0000313|EMBL:KGJ91821.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
glycoprotease
BD02T64_scaffold_22_424
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

506551..506922
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE44416.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
BD02T64_scaffold_22_425
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

506976..507659
-----------------
DNA (684bp)
protein (228aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T6_COLP3
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ28843.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryth
BD02T64_scaffold_22_426
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

507670..508560
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI00038087CF
Uncharacterized protein {ECO:0000313|EMBL:KJE44415.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
lipase
BD02T64_scaffold_22_427
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

508725..510395
-----------------
DNA (1671bp)
protein (557aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:KJE44414.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KJE44414.1};; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwel
fadD1; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T3_COLP3
BD02T64_scaffold_22_428
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(510466..511203)
-----------------
DNA (738bp)
protein (246aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486T1_COLP3
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGJ87247.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
short chain dehydrogenase
BD02T64_scaffold_22_429
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

511625..514105
-----------------
DNA (2481bp)
protein (827aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036A06CC rbh
Extracellular lipase, Pla-1/cef family {ECO:0000313|EMBL:KGJ87248.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
hypothetical protein
BD02T64_scaffold_22_430
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

514299..516842
-----------------
DNA (2544bp)
protein (848aa)
hypothetical protein n=1 Tax=Pseudoalteromonas sp. PAMC 22718 RepID=UPI0002DC9E00
Uncharacterized protein {ECO:0000313|EMBL:KJE43652.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
peptidase S45, penicillin amidase
BD02T64_scaffold_22_431
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

516970..518031
-----------------
DNA (1062bp)
protein (354aa)
sohB; periplasmic protease (EC:3.4.21.-)
SohB protein, peptidase U7 family {ECO:0000313|EMBL:AAZ24866.1}; EC=3.4.21.- {ECO:0000313|EMBL:AAZ24866.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwe
SohB protein, peptidase U7 family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S9_COLP3
BD02T64_scaffold_22_432
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(518100..519494)
-----------------
DNA (1395bp)
protein (465aa)
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family n=1 Tax=Algoriphagus machipongonensis RepID=A3HVG1_9BACT
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family {ECO:0000313|EMBL:EAZ82133.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriac
sodium:dicarboxylate symporter
BD02T64_scaffold_22_433
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

519714..524009
-----------------
DNA (4296bp)
protein (1432aa)
Ig domain protein, group 1 domain protein n=1 Tax=Pseudoalteromonas sp. BSi20311 RepID=G7ESG5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ95766.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
Ig domain-containing protein
BD02T64_scaffold_22_434
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(524095..525204)
-----------------
DNA (1110bp)
protein (370aa)
Agmatinase {ECO:0000313|EMBL:KGJ91830.1}; EC=3.5.3.11 {ECO:0000313|EMBL:KGJ91830.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" s
arginase n=1 Tax=Colwellia piezophila RepID=UPI0003639393
arginase
BD02T64_scaffold_22_435
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

525583..528255
-----------------
DNA (2673bp)
protein (891aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=28229 species="Bacteria; Proteobacte
topA; DNA topoisomerase I (EC:5.99.1.2)
topoisomerase I n=1 Tax=Colwellia piezophila RepID=UPI0003678A99
BD02T64_scaffold_22_436
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(528317..528688)
-----------------
DNA (372bp)
protein (124aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S4_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ24308.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_22_437
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(528771..529538)
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003671C2F
Uncharacterized protein {ECO:0000313|EMBL:KGJ91833.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_438
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529824..530798
-----------------
DNA (975bp)
protein (325aa)
Cys regulon transcription activator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486S2_COLP3
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGJ87256.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
cysB; transcriptional regulator CysB
BD02T64_scaffold_22_439
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530858..532234)
-----------------
DNA (1377bp)
protein (459aa)
sdaA; L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:AAZ25704.1}; EC=4.3.1.17 {ECO:0000313|EMBL:AAZ25704.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; C
L-serine ammonia-lyase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y35_COLP3
BD02T64_scaffold_22_440
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(532380..532952)
-----------------
DNA (573bp)
protein (191aa)
MutT/nudix family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y37_COLP3
NUDIX hydrolase {ECO:0000313|EMBL:KGJ96206.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibri
MutT/nudix family protein
BD02T64_scaffold_22_441
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(532956..534446)
-----------------
DNA (1491bp)
protein (497aa)
Para-aminobenzoate synthase, component I n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y38_COLP3
pabB; para-aminobenzoate synthase component I
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:AAZ27246.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
BD02T64_scaffold_22_442
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

534591..536120
-----------------
DNA (1530bp)
protein (510aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit {ECO:0000313|EMBL:KGJ96204.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KGJ96204.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteob
fumarate hydratase n=1 Tax=Colwellia piezophila RepID=UPI000366A9C8
fumarate hydratase, class I
BD02T64_scaffold_22_443
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(536196..537029)
-----------------
DNA (834bp)
protein (278aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DAPD_COLP3
BD02T64_scaffold_22_444
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537072..539708)
-----------------
DNA (2637bp)
protein (879aa)
glnD; protein-P-II uridylyltransferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=GLND_COLP3
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000255|HAMAP-Rule:MF_00277}; Short=UTase/UR {ECO:0000255|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000
BD02T64_scaffold_22_445
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(539740..540528)
-----------------
DNA (789bp)
protein (263aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase n=1 Tax=Colwellia piezophila RepID=UPI0003823821
BD02T64_scaffold_22_446
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(540539..541207)
-----------------
DNA (669bp)
protein (223aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485H1_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ27171.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_22_447
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


541573..542301
-----------------
DNA (729bp)
protein (243aa)
30S ribosomal protein S2 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RS2_COLP3 rbh
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
BD02T64_scaffold_22_448
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

542466..543314
-----------------
DNA (849bp)
protein (283aa)
Elongation factor Ts n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=EFTS_COLP3
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacter
tsf; elongation factor Ts
BD02T64_scaffold_22_449
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

543553..544281
-----------------
DNA (729bp)
protein (243aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=PYRH_COLP3
BD02T64_scaffold_22_450
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544344..544901
-----------------
DNA (558bp)
protein (186aa)
ribosome recycling factor n=1 Tax=Colwellia piezophila RepID=UPI000381D58F
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=28229 species="Bacteria; P
frr; ribosome recycling factor
Displaying items 421-450 of 563 in total

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