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BD02T64_scaffold_22

Search features with annotation key words

Displaying items 451-480 of 563 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_22_451
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544984..545736
-----------------
DNA (753bp)
protein (251aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
uppS; undecaprenyl diphosphate synthase (EC:2.5.1.31)
UDP pyrophosphate synthase n=1 Tax=Colwellia piezophila RepID=UPI000362C3F8 rbh
BD02T64_scaffold_22_452
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

545868..546734
-----------------
DNA (867bp)
protein (289aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485G5_COLP3
BD02T64_scaffold_22_453
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

546774..547970
-----------------
DNA (1197bp)
protein (399aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=DXR_COLP3
BD02T64_scaffold_22_454
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

548007..549368
-----------------
DNA (1362bp)
protein (454aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
zinc metallopeptidase RseP n=1 Tax=Colwellia piezophila RepID=UPI000360AF60
ecfE; membrane-associated zinc metalloprotease EcfE
BD02T64_scaffold_22_455
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

549649..552123
-----------------
DNA (2475bp)
protein (825aa)
Outer membrane protein assembly factor BamA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485G2_COLP3
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alt
OMP85 family outer membrane protein
BD02T64_scaffold_22_456
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

552225..552722
-----------------
DNA (498bp)
protein (166aa)
Outer membrane protein, OmpH family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485G1_COLP3
OmpH family outer membrane protein
Outer membrane protein, OmpH family {ECO:0000313|EMBL:AAZ28206.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
BD02T64_scaffold_22_457
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

552726..553769
-----------------
DNA (1044bp)
protein (348aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromo
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00037A0B00
BD02T64_scaffold_22_458
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

553888..554340
-----------------
DNA (453bp)
protein (151aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
3-hydroxyacyl-ACP dehydratase n=1 Tax=Colwellia piezophila RepID=UPI000380807D
BD02T64_scaffold_22_459
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

554398..555168
-----------------
DNA (771bp)
protein (257aa)
lpxA; UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485F8_COLP3
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
BD02T64_scaffold_22_460
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

555258..556406
-----------------
DNA (1149bp)
protein (383aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=28229 species="Bac
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=LPXB_COLP3
BD02T64_scaffold_22_461
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

556423..557055
-----------------
DNA (633bp)
protein (211aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=167879 species="Bacteria; Proteobacteria;
Ribonuclease HII n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RNH2_COLP3
BD02T64_scaffold_22_462
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

557048..560620
-----------------
DNA (3573bp)
protein (1191aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelli
DNA polymerase III, alpha subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485F3_COLP3
BD02T64_scaffold_22_463
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

560752..561708
-----------------
DNA (957bp)
protein (319aa)
accA; acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ACCA_COLP3
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
BD02T64_scaffold_22_464
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

561732..563096
-----------------
DNA (1365bp)
protein (455aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tilS; tRNA(Ile)-lysidine synthetase (EC:6.-.-.-)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003600D39
BD02T64_scaffold_22_465
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(563130..564356)
-----------------
DNA (1227bp)
protein (409aa)
Serine/threonine transporter SstT n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=SSTT_COLP3
serine/threonine transporter SstT
Serine/threonine transporter SstT {ECO:0000255|HAMAP-Rule:MF_01582}; Na(+)/serine-threonine symporter {ECO:0000255|HAMAP-Rule:MF_01582}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobact
BD02T64_scaffold_22_466
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

564524..565093
-----------------
DNA (570bp)
protein (190aa)
Putative phosphonoacetate hydrolase PhnA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E9_COLP3
phosphonoacetate hydrolase PhnA
Putative phosphonoacetate hydrolase PhnA {ECO:0000313|EMBL:AAZ24415.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
BD02T64_scaffold_22_467
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(565221..565664)
-----------------
DNA (444bp)
protein (148aa)
Ferric uptake regulation protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E8_COLP3
fur; ferric uptake regulator
Ferric uptake regulator {ECO:0000313|EMBL:KJE42868.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
BD02T64_scaffold_22_468
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(565850..566374)
-----------------
DNA (525bp)
protein (175aa)
flavodoxin n=1 Tax=Colwellia piezophila RepID=UPI0003742810
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio p
flavodoxin FldA
BD02T64_scaffold_22_469
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566402..566683)
-----------------
DNA (282bp)
protein (94aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E6_COLP3
CopG-like domain-containing protein DNA-binding protein {ECO:0000313|EMBL:KGJ91313.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;"
LexA regulated protein
BD02T64_scaffold_22_470
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566683..566949)
-----------------
DNA (267bp)
protein (89aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037DD4AF rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ91312.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_471
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(567326..568111)
-----------------
DNA (786bp)
protein (262aa)
Hydrolase, alpha/beta fold family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E4_COLP3
alpha/beta hydrolase
Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:AAZ26912.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psy
BD02T64_scaffold_22_472
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

568221..568808
-----------------
DNA (588bp)
protein (196aa)
N-carbamyl-L-amino acid amidohydrolase n=1 Tax=Colwellia piezophila RepID=UPI00037F3B3E
Negative modulator of initiation of replication {ECO:0000256|HAMAP-Rule:MF_00908, ECO:0000256|PIRNR:PIRNR019401}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; C
seqA; replication initiation regulator SeqA
BD02T64_scaffold_22_473
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

568854..570506
-----------------
DNA (1653bp)
protein (551aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:AAZ25801.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AAZ25801.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Al
Phosphoglucomutase, alpha-D-glucose phosphate-specific n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E2_COLP3
BD02T64_scaffold_22_474
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

570563..571651
-----------------
DNA (1089bp)
protein (363aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=137584 species="B
succinylglutamate desuccinylase (EC:3.5.1.96)
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI00036C12BA
BD02T64_scaffold_22_475
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

572157..573338
-----------------
DNA (1182bp)
protein (394aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) {ECO:0000313|EMBL:KGJ97098.1}; EC=1.2.4.4 {ECO:0000313|EMBL:KGJ97098.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammapro
2-oxoisovalerate dehydrogenase complex, E1 component subunit alpha (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Colwellia piezophila RepID=UPI000373E00D
BD02T64_scaffold_22_476
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

573341..574318
-----------------
DNA (978bp)
protein (326aa)
2-oxoisovalerate dehydrogenase complex, E1 component subunit beta (EC:1.2.4.4)
2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit {ECO:0000313|EMBL:AAZ24031.1}; EC=1.2.4.4 {ECO:0000313|EMBL:AAZ24031.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteo
2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485E0_COLP3
BD02T64_scaffold_22_477
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

574367..575608
-----------------
DNA (1242bp)
protein (414aa)
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase {ECO:0000313|EMBL:KGJ91306.1}; EC=2.3.1.168 {ECO:0000313|EMBL:KGJ91306.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteri
2-oxoisovalerate dehydrogenase complex, E2 component, lipoamide acyltransferase (EC:2.3.1.-)
dihydrolipoamide acetyltransferase n=1 Tax=Colwellia piezophila RepID=UPI000374C699
BD02T64_scaffold_22_478
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(575684..576277)
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMS5_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58619.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
BD02T64_scaffold_22_479
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

576329..578176
-----------------
DNA (1848bp)
protein (616aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484S0_COLP3
protein kinase
Uncharacterized protein {ECO:0000313|EMBL:AAZ28174.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_22_480
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

578207..578644
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6X0C5_9ALTE
Glyoxalase {ECO:0000313|EMBL:KJE46949.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
Lactoylglutathione lyase-like protein
Displaying items 451-480 of 563 in total

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