ggKbase home page

BD02T64_scaffold_22

Search features with annotation key words

Displaying items 511-540 of 563 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_22_511
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

612421..613824
-----------------
DNA (1404bp)
protein (468aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase la
cysN; sulfate adenylate transferase, subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=CYSN_COLP3
BD02T64_scaffold_22_512
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

613846..615573
-----------------
DNA (1728bp)
protein (576aa)
transporter n=1 Tax=Colwellia piezophila RepID=UPI00037B902E
Sodium/sulfate symporter {ECO:0000313|EMBL:KGJ89865.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
transporter
BD02T64_scaffold_22_513
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

615617..616231
-----------------
DNA (615bp)
protein (205aa)
cysC; adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-R
Adenylyl-sulfate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482Z7_COLP3
BD02T64_scaffold_22_514
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

616236..617219
-----------------
DNA (984bp)
protein (328aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482Z6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ89863.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_515
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

617285..618295
-----------------
DNA (1011bp)
protein (337aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KGJ93537.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KGJ93537.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482Z5_COLP3
BD02T64_scaffold_22_516
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(618379..619599)
-----------------
DNA (1221bp)
protein (407aa)
EAL domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47YI2_COLP3
Diguanylate phosphodiesterase metal dependent hydrolase domain containing protein {ECO:0000313|EMBL:KGJ96076.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Co
diguanylate phosphodiesterase
BD02T64_scaffold_22_517
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

619823..621310
-----------------
DNA (1488bp)
protein (496aa)
proline:sodium symporter n=1 Tax=Colwellia piezophila RepID=UPI000375B976
Sodium/proline symporter {ECO:0000313|EMBL:KGJ96075.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
putP; proline/sodium symporter
BD02T64_scaffold_22_518
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

621372..622931
-----------------
DNA (1560bp)
protein (520aa)
UPF0061 protein Ping_1567 n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SV54_PSYIN
UPF0061 protein SG35_20840 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomona
hypothetical protein
BD02T64_scaffold_22_519
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(623006..623719)
-----------------
DNA (714bp)
protein (238aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZA8_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ26845.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_22_520
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(623712..624275)
-----------------
DNA (564bp)
protein (188aa)
RNA polymerase sigma factor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZA9_COLP3
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychre
BD02T64_scaffold_22_521
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(624285..626012)
-----------------
DNA (1728bp)
protein (576aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003712BB2
Aerotolerance-related protein BatD {ECO:0000313|EMBL:KGJ87409.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" so
batD protein
BD02T64_scaffold_22_522
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(626006..628006)
-----------------
DNA (2001bp)
protein (667aa)
TPR domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZB1_COLP3
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:KGJ86730.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source
TPR domain-containing protein
BD02T64_scaffold_22_523
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(628027..629016)
-----------------
DNA (990bp)
protein (330aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036D5CC6
IMP dehydrogenase {ECO:0000313|EMBL:KJE45334.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
von Willebrand factor type A domain-containing protein
BD02T64_scaffold_22_524
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(629013..629555)
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036B70BD
Uncharacterized protein {ECO:0000313|EMBL:KGJ86732.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_525
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(629543..630604)
-----------------
DNA (1062bp)
protein (354aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZB3_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ86733.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_22_526
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(630631..631596)
-----------------
DNA (966bp)
protein (322aa)
ATPase AAA n=1 Tax=Colwellia piezophila RepID=UPI000362F434
ATPase AAA {ECO:0000313|EMBL:KJE43468.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
hypothetical protein
BD02T64_scaffold_22_527
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

631896..633200
-----------------
DNA (1305bp)
protein (435aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022530}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022453};; ACSs {ECO:0000256|HAMAP-Rule:MF
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase n=1 Tax=Colwellia piezophila RepID=UPI000375F89F
BD02T64_scaffold_22_528
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

633200..635368
-----------------
DNA (2169bp)
protein (723aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3)
fatty-acid oxidation protein subunit alpha n=1 Tax=Colwellia piezophila RepID=UPI00037DCDED
Fatty acid oxidation complex subunit alpha {ECO:0000256|SAAS:SAAS00051619}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source
BD02T64_scaffold_22_529
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

635708..635923
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE43471.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
BD02T64_scaffold_22_530
unknown

Not on your lists

comp(636206..636457)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

BD02T64_scaffold_22_531
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(636662..641203)
-----------------
DNA (4542bp)
protein (1514aa)
Sensory box protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6XZF8_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KGK00746.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
BD02T64_scaffold_22_532
unknown

Not on your lists

comp(641408..641551)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

BD02T64_scaffold_22_533
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(641517..644327)
-----------------
DNA (2811bp)
protein (937aa)
zinc metallopeptidase (EC:3.4.24.-)
Zinc metallopeptidase, M16 family {ECO:0000313|EMBL:AAZ25647.1}; EC=3.4.24.- {ECO:0000313|EMBL:AAZ25647.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwe
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037799A2
BD02T64_scaffold_22_534
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

644542..645051
-----------------
DNA (510bp)
protein (170aa)
sixA; phosphohistidine phosphatase SixA (EC:3.1.3.-)
Phosphohistidine phosphatase SixA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZB9_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KJE45550.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
BD02T64_scaffold_22_535
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(645065..645631)
-----------------
DNA (567bp)
protein (189aa)
Smr domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZC0_COLP3
hypothetical protein
Smr domain protein {ECO:0000313|EMBL:AAZ24410.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (s
BD02T64_scaffold_22_536
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

645715..646656
-----------------
DNA (942bp)
protein (314aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine
50S ribosomal protein L3 glutamine methyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZC2_COLP3
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
BD02T64_scaffold_22_537
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

646680..647804
-----------------
DNA (1125bp)
protein (375aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase (EC:4.2.3.5)
chorismate synthase n=1 Tax=Colwellia piezophila RepID=UPI000375FBDE
BD02T64_scaffold_22_538
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

647859..649043
-----------------
DNA (1185bp)
protein (395aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036C15F1
Major facilitator superfamily associated domain containing protein {ECO:0000313|EMBL:KGJ87422.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Co
hypothetical protein
BD02T64_scaffold_22_539
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(649118..649591)
-----------------
DNA (474bp)
protein (158aa)
Chaperone protein IbpA n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y72_COLP3
Heat shock protein Hsp20 {ECO:0000313|EMBL:KGJ96164.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
ibpA; chaperone protein IbpA
BD02T64_scaffold_22_540
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(649885..650553)
-----------------
DNA (669bp)
protein (223aa)
Antioxidant, AhpC/TSA family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Y73_COLP3
anti-oxidant AhpCTSA family protein
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:AAZ27451.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrer
Displaying items 511-540 of 563 in total

View Taxonomy