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BD02T64_scaffold_58

Search features with annotation key words

Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_58_1
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2098
DNA (2097bp) protein (699aa)
Methyl-accepting chemotaxis protein n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QHE2_GLANF
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EEY73486.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia hollis
putative Methyl-accepting chemotaxis protein (MCP) fused with PAS/PAC domain
BD02T64_scaffold_58_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2105..2965
DNA (861bp) protein (287aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
cheR; CheR-type MCP methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase n=1 Tax=Glaciecola pallidula DSM 14239 = ACAM 615 RepID=K6ZYX4_9ALTE
BD02T64_scaffold_58_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3039..3692
DNA (654bp) protein (218aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; A
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037F449A
cheD; chemotaxis protein CheD
BD02T64_scaffold_58_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3789..4877
DNA (1089bp) protein (363aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=28229 species="Bacteria; Proteobacteria; Gammapr
cheB; chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QLA9_GLANF
BD02T64_scaffold_58_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4864..6063
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00036ED673
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:KGJ87674.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
mcp; methyl-accepting chemotaxis sensory transducer
BD02T64_scaffold_58_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6089..6397
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00035F3AFE
Anti-sigma-factor antagonist {ECO:0000313|EMBL:KGJ87673.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
anti-sigma factor antagonist
BD02T64_scaffold_58_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6419..8158
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C6FC7
Response regulator receiver protein {ECO:0000313|EMBL:KGJ87672.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
sensor histidine kinase/response regulator
BD02T64_scaffold_58_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8229..9386
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037C8D3E
Response regulator receiver protein {ECO:0000313|EMBL:KGJ87671.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
response regulator receiver protein
BD02T64_scaffold_58_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9383..11563
DNA (2181bp) protein (727aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003771321
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:KGJ87670.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
two-component sensory box histidine kinase/response regulator
BD02T64_scaffold_58_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11585..12967
DNA (1383bp) protein (461aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KXV1_SIMAS
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:KGJ87669.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;
response regulator receiver modulated diguanylate cyclase
BD02T64_scaffold_58_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13180..13650
DNA (471bp) protein (157aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48)
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AAZ27653.1}; EC=3.1.3.48 {ECO:0000313|EMBL:AAZ27653.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Col
Phosphotyrosine protein phosphatase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZQ5_COLP3
BD02T64_scaffold_58_12
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13666..14121
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U930_CROAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP86316.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlantic
BD02T64_scaffold_58_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14166..15215)
DNA (1050bp) protein (350aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZQ6_COLP3
BD02T64_scaffold_58_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15365..16174)
DNA (810bp) protein (270aa)
PEP synthetase regulatory protein n=1 Tax=Colwellia piezophila RepID=UPI00037B781B
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Sho
hypothetical protein
BD02T64_scaffold_58_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16332..18707
DNA (2376bp) protein (792aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037BF52A
BD02T64_scaffold_58_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19014..21095
DNA (2082bp) protein (694aa)
Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V3_COLP3
sensory box protein
Sensory box/GGDEF/EAL domain protein {ECO:0000313|EMBL:AAZ27022.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_58_17
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21106..21573)
DNA (468bp) protein (156aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1004785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=J9Y4W1_ALTMA
ybaK/ebsC protein
BD02T64_scaffold_58_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21669..22970
DNA (1302bp) protein (434aa)
Exonuclease SbcD n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G5_COLP3
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:KGJ92036.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
sbcD; exonuclease SbcD
BD02T64_scaffold_58_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22967..26476
DNA (3510bp) protein (1170aa)
Exonuclease SbcC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G6_COLP3
sbcC; exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:AAZ25382.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (str
BD02T64_scaffold_58_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26523..27422
DNA (900bp) protein (300aa)
Membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G7_COLP3
membrane protein
Membrane protein {ECO:0000313|EMBL:AAZ25698.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (str
BD02T64_scaffold_58_21
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27491..27985
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
slyD1; FKBP-type peptidylprolyl isomerase (EC:5.2.1.8)
peptidyl-prolyl cis-trans isomerase n=1 Tax=Colwellia piezophila RepID=UPI00036BA1FB
BD02T64_scaffold_58_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28081..29394
DNA (1314bp) protein (438aa)
Putative Xaa-Pro dipeptidase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486C4_COLP3
Amidohydrolase {ECO:0000313|EMBL:KGJ96859.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psyc
Xaa-Pro dipeptidase
BD02T64_scaffold_58_23
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29402..30295)
DNA (894bp) protein (298aa)
Membrane protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6XXY4_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE38619.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
drug/metabolite transporter (DMT) superfamily permease
BD02T64_scaffold_58_24
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30464..33973
DNA (3510bp) protein (1170aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
recC; exodeoxyribonuclease V subunit gamma (EC:3.1.11.5)
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480N8_COLP3
BD02T64_scaffold_58_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33970..37671
DNA (3702bp) protein (1234aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
recB; exodeoxyribonuclease V subunit beta (EC:3.1.11.5)
Exodeoxyribonuclease V, beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480N9_COLP3
BD02T64_scaffold_58_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37671..39659
DNA (1989bp) protein (663aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003611243
BD02T64_scaffold_58_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39793..40302
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000376C7A3
Uncharacterized protein {ECO:0000313|EMBL:KGJ92793.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_58_28
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40521..40739)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=IF1_COLP3
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thal
BD02T64_scaffold_58_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40916..41635)
DNA (720bp) protein (240aa)
arginyl-tRNA-protein transferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase {ECO:0000255|HAMAP-Rule:MF_00689}; Short=Arginyltransferase {ECO:0000255|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000255|HAMAP-Rule:MF_00689};; EC=2.
Putative arginyl-tRNA--protein transferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=ATE_COLP3
BD02T64_scaffold_58_30
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41663..42391)
DNA (729bp) protein (243aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
leucyl-tRNA--protein transferase n=1 Tax=Colwellia piezophila RepID=UPI000362C15F
Displaying items 1-30 of 230 in total

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