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BD02T64_scaffold_85

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Displaying items 1-30 of 312 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_85_1
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(800..1987)
DNA (1188bp) protein (396aa)
Putative MFS transporter family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486L4_COLP3
MFS transporter family protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ90631.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
BD02T64_scaffold_85_2
unknown

Not on your lists

2011..2262
DNA (252bp) protein (84aa)

This feature has no annotations

BD02T64_scaffold_85_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2396..3583
DNA (1188bp) protein (396aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=METK_COLP3
BD02T64_scaffold_85_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3743..4489
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alte
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486L8_COLP3
16S ribosomal RNA methyltransferase RsmE
BD02T64_scaffold_85_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4531..5490
DNA (960bp) protein (320aa)
gshB; glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:
Glutathione synthetase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486L9_COLP3
BD02T64_scaffold_85_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5512..6159
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037BAB77
UPF0301 protein GAB14E_3033 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
hypothetical protein
BD02T64_scaffold_85_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6181..6627
DNA (447bp) protein (149aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=28229 species
Putative Holliday junction resolvase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RUVX_COLP3
Holliday junction resolvase-like protein
BD02T64_scaffold_85_8
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6661..7617
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=2 Tax=Pseudoalteromonas RepID=G7EWK6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE41004.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_85_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7631..8545)
DNA (915bp) protein (305aa)
LysR family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI00036CA27A
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGJ91868.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
LysR family transcriptional regulator
BD02T64_scaffold_85_10
Shewanella pealeana, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8595..9173
DNA (579bp) protein (193aa)
NADPH-dependent FMN reductase n=1 Tax=Colwellia piezophila RepID=UPI00036D8731
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABV88527.1}; TaxID=398579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella peal
BD02T64_scaffold_85_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9450..10712
DNA (1263bp) protein (421aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
diaminopimelate decarboxylase n=1 Tax=Colwellia piezophila RepID=UPI00037C5074
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
BD02T64_scaffold_85_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10832..11176)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486N4_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ26074.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_85_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11424..11729
DNA (306bp) protein (102aa)
transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI00037BC4EA
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KGJ87286.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_85_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12010..14475
DNA (2466bp) protein (822aa)
TonB-dependent receptor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q48AI3_COLP3
TonB-dependent receptor {ECO:0000313|EMBL:KGJ92624.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
TonB-dependent receptor
BD02T64_scaffold_85_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14686..15786
DNA (1101bp) protein (367aa)
Methyl-accepting chemotaxis protein n=1 Tax=Pseudoalteromonas sp. (strain SM9913) RepID=E6RGN9_PSEU9
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:KGJ87290.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
methyl-accepting chemotaxis protein
BD02T64_scaffold_85_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15921..16601
DNA (681bp) protein (227aa)
Putative lipoprotein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q481J3_COLP3
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAZ24987.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
BD02T64_scaffold_85_17
Pseudoalteromonas sp. OCN003, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16624..16896)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1L0D5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY65241.1}; TaxID=1348114 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
BD02T64_scaffold_85_18
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16997..17746)
DNA (750bp) protein (250aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1LRW6_9GAMM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERG43931.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromona
hypothetical protein
BD02T64_scaffold_85_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17883..19556
DNA (1674bp) protein (558aa)
ABC transporter, ATP-binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XC5_COLP3
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:KGJ93260.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwel
ABC transporter ATP-binding protein
BD02T64_scaffold_85_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19716..20078
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00035D533C
hypothetical protein
Cyclic diguanosine monophosphate-binding protein {ECO:0000256|PIRNR:PIRNR028141}; Short=c-di-GMP-binding protein {ECO:0000256|PIRNR:PIRNR028141};; Pilz domain-containing protein {ECO:0000256|PIRNR:PIR
BD02T64_scaffold_85_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20136..20633
DNA (498bp) protein (166aa)
ACT domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XC3_COLP3
ACT domain-containing protein
ACT domain protein {ECO:0000313|EMBL:AAZ23982.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (s
BD02T64_scaffold_85_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20724..21767)
DNA (1044bp) protein (348aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
Phosphate regulon sensor protein PhoR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486R3_COLP3
phoR; phosphate regulon sensor protein PhoR
BD02T64_scaffold_85_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21810..22511)
DNA (702bp) protein (234aa)
Phosphate regulon response regulator PhoB n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486R4_COLP3
Two component transcriptional regulator PhoB, winged helix family {ECO:0000313|EMBL:KGJ87263.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Col
phoB; phosphate regulon response regulator PhoB
BD02T64_scaffold_85_24
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22690..23637)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003717F84
Porin {ECO:0000313|EMBL:KJE46626.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
Outer membrane porin
BD02T64_scaffold_85_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23985..25730
DNA (1746bp) protein (582aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
Sensor histidine kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486R7_COLP3
sensor histidine kinase
BD02T64_scaffold_85_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25863..26786
DNA (924bp) protein (308aa)
Recombination-associated protein RdgC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=RDGC_COLP3
rdgC; recombination associated protein
Recombination-associated protein RdgC {ECO:0000255|HAMAP-Rule:MF_00194}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
BD02T64_scaffold_85_27
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26829..28016
DNA (1188bp) protein (396aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=28229 species="Bacteria; P
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=PGK_COLP3
BD02T64_scaffold_85_28
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28192..29097
DNA (906bp) protein (302aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:AFT77347.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AFT77347.1};; TaxID=1004785 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alt
Fructose-1,6-bisphosphate aldolase n=1 Tax=Alteromonas macleodii (strain Black Sea 11) RepID=K0D0T7_ALTMS rbh
BD02T64_scaffold_85_29
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29354..30418
DNA (1065bp) protein (355aa)
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype {ECO:0000313|EMBL:KGJ96433.1}; EC=4.1.2.13 {ECO:0000313|EMBL:KGJ96433.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobact
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase, class II n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XD2_COLP3
BD02T64_scaffold_85_30
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30657..31520
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XD1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KJE43347.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
Displaying items 1-30 of 312 in total

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